FC869212

Overview
NameFC869212
Unique NameFC869212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length401
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS4 (Chaperone protein dnaK OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.217e-46
Identity = 88/133 (66.17%), Postives = 107/133 (80.45%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+VIENSEG+RTTPS+V F    E LVG PAKRQA TNP+NT+F  KRLIGR+  D + +++ ++V Y IV   NGDAWVE  G++YSPSQI AF+L KMKETAE+YLG+SV++AVITVPAYFNDAQRQA
Sbjct:   21 GAQPRVIENSEGARTTPSIVGFTDS-ERLVGQPAKRQAVTNPSNTVFAVKRLIGRRVGDAEVEKDKKLVPYSIVNGGNGDAWVEVRGEKYSPSQISAFILQKMKETAEAYLGESVTQAVITVPAYFNDAQRQA 152
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_PARDP (Chaperone protein dnaK OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.217e-46
Identity = 90/133 (67.67%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  PKVIENSEG+RTTPS+VAF    E LVG PAKRQA TNP+NT+F  KRLIGR+  D + +++ ++V Y IV   NGDAWVE  G +YSPSQI AF+L KMKETAESYLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GSQPKVIENSEGARTTPSIVAFTDS-ERLVGQPAKRQAVTNPSNTVFAVKRLIGRRTTDAEVEKDKKLVPYAIVDGGNGDAWVEVRGDKYSPSQISAFILQKMKETAESYLGEPVTQAVITVPAYFNDAQRQA 152
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_NITOC (Chaperone protein dnaK OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.217e-46
Identity = 88/133 (66.17%), Postives = 107/133 (80.45%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+VIEN+EG RTTPSVVAF ++GE LVG  AKRQA TNP NTL+  KRLIGR+FD+   QR+++MV YKIV+A NGDAWVEA G++ +P ++ A VL KMK+TAE YLG+ V  AVITVPAYFND+QRQA
Sbjct:   21 GNKPRVIENAEGDRTTPSVVAFTKEGETLVGQSAKRQAITNPQNTLYAIKRLIGRRFDEEVVQRDIKMVPYKIVKADNGDAWVEATGKKMAPPEVSANVLRKMKKTAEDYLGEEVEAAVITVPAYFNDSQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_METFK (Chaperone protein dnaK OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.217e-46
Identity = 85/133 (63.91%), Postives = 108/133 (81.20%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+VIEN+EG+RTTPSV+A+ + GE+LVG PAKRQA TNP NTLF  KRLIGR+FD+ + Q+++ ++ Y I +A NGDAWVE  GQ+ +P QI A VL KMK+TAE YLG+ V++AVITVPAYFND+QRQA
Sbjct:   21 GGKPRVIENAEGARTTPSVIAYQEDGEILVGAPAKRQAVTNPKNTLFAVKRLIGRRFDEKEVQKDIGLMPYTITKADNGDAWVEVRGQKLAPPQISAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF5 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.217e-46
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G   KVIENSEG RTTPS+VA  ++GE+LVG  AKRQA TNP NT++  KRLIGRKFDD + Q++++ V YK+++A NGDAWVE   ++YS  QI AF+L KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GDKVKVIENSEGKRTTPSIVAITEEGEVLVGEAAKRQAVTNPENTVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVEVRDKKYSAQQISAFILQKMKKTAEDYLGEKVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_ACIF2 (Chaperone protein dnaK OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.217e-46
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G   KVIENSEG RTTPS+VA  ++GE+LVG  AKRQA TNP NT++  KRLIGRKFDD + Q++++ V YK+++A NGDAWVE   ++YS  QI AF+L KMK+TAE YLG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GDKVKVIENSEGKRTTPSIVAITEEGEVLVGEAAKRQAVTNPENTVYEVKRLIGRKFDDAEVQKDLKHVPYKVIKADNGDAWVEVRDKKYSAQQISAFILQKMKKTAEDYLGEKVTEAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.204e-45
Identity = 84/133 (63.16%), Postives = 106/133 (79.70%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+ENSEG RTTPS++A+ Q GE+LVG PAKRQ+ TNP NTLF  KRLIGR++ D + QR++ ++ YKIV A NGDAW+E  GQ+ +P QI A +L KMK+TAE YLG+ V++AVITVPAYFND QRQA
Sbjct:   21 GSKPRVLENSEGDRTTPSIIAYTQDGEILVGQPAKRQSVTNPQNTLFAIKRLIGRRYQDEEVQRDVSIMPYKIVAADNGDAWLEVKGQKMAPPQISAEILKKMKKTAEDYLGEPVTEAVITVPAYFNDTQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS5 (Chaperone protein dnaK OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.204e-45
Identity = 88/133 (66.17%), Postives = 107/133 (80.45%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+VIENSEG+RTTPS+V F    E LVG PAKRQA TNP+NT+F  KRLIGR+  D + +++ ++V Y IV   NGDAWVE  G++YSPSQI AF+L KMKETAE+YLG+SV++AVITVPAYFNDAQRQA
Sbjct:   21 GAQPRVIENSEGARTTPSIVGFTDS-ERLVGQPAKRQAVTNPSNTVFAVKRLIGRRVGDAEVEKDKKLVPYAIVNGGNGDAWVEVRGEKYSPSQISAFILQKMKETAEAYLGESVTQAVITVPAYFNDAQRQA 152
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_RALPJ (Chaperone protein dnaK OS=Ralstonia pickettii (strain 12J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.204e-45
Identity = 84/133 (63.16%), Postives = 108/133 (81.20%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  PKVIEN+EG+RTTPS++A+ + GE+LVG PAKRQA TNP NTL+  KRLIGRKF++ + Q+++ ++ Y IV+A NGDAWVE  GQ+ +P QI A  L KMK+TAE YLG+ V++AVITVPAYFND+QRQA
Sbjct:   21 GNTPKVIENAEGARTTPSIIAYMEDGEILVGAPAKRQAVTNPKNTLYAVKRLIGRKFEEKEVQKDIGLMPYSIVKADNGDAWVEVRGQKLAPPQISAETLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAP (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dnaK PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.204e-45
Identity = 84/133 (63.16%), Postives = 107/133 (80.45%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  P+V+ENSEG RTTPS++A+ +KGE+LVG PAKRQA TNP NTLF  KRLIGRKF D + QR+++++ Y I+ + NGDAW++   Q+ +P QI A VL KMK+TAE YLG+S+ +AVITVPAYFNDAQRQA
Sbjct:   21 GNKPRVLENSEGDRTTPSIIAYTEKGEVLVGQPAKRQAITNPKNTLFAIKRLIGRKFRDDEVQRDIKIMPYSIINSENGDAWIDVKKQKMAPPQISAEVLKKMKKTAEDYLGESIKEAVITVPAYFNDAQRQA 153
The following BLAST results are available for this feature:
BLAST of FC869212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHOS49.217e-4666.17Chaperone protein dnaK OS=Rhodobacter sphaeroides ... [more]
DNAK_PARDP9.217e-4667.67Chaperone protein dnaK OS=Paracoccus denitrificans... [more]
DNAK_NITOC9.217e-4666.17Chaperone protein dnaK OS=Nitrosococcus oceani (st... [more]
DNAK_METFK9.217e-4663.91Chaperone protein dnaK OS=Methylobacillus flagella... [more]
DNAK_ACIF59.217e-4664.66Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_ACIF29.217e-4664.66Chaperone protein dnaK OS=Acidithiobacillus ferroo... [more]
DNAK_SODGM1.204e-4563.16Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_RHOS51.204e-4566.17Chaperone protein dnaK OS=Rhodobacter sphaeroides ... [more]
DNAK_RALPJ1.204e-4563.16Chaperone protein dnaK OS=Ralstonia pickettii (str... [more]
DNAK_BUCAP1.204e-4563.16Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]

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Properties
Property NameValue
Genbank descriptionC31009G02EF AbioticL1 Citrus clementina cDNA clone C31009G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869212 ID=FC869212; Name=FC869212; organism=Citrus clementina; type=EST; length=401bp
GGGAAAGAACCCCAAAGTTATTGAGAACTCCGAAGGATCTAGGACTACAC
CATCAGTTGTAGCTTTCAATCAGAAGGGAGAGCTACTTGTGGGTACACCA
GCAAAGCGTCAGGCTGCGACCAACCCGACTAACACGCTCTTTGGCACCAA
GCGTTTAATTGGTAGAAAATTTGATGATCCCCAGACGCAAAGAGAAATGC
AGATGGTTTCATATAAGATAGTAAGGGCCCCCAATGGGGATGCTTGGGTT
GAAGCCAATGGGCAGCAGTACTCGCCAAGTCAGATTGGGGCCTTTGTTCT
GACCAAGATGAAAGAAACTGCAGAATCCTACCTTGGAAAGTCAGTTTCAA
AAGCAGTAATCACAGTTCCAGCTTATTTCAACGATGCTCAAAGGCAAGCT
A
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