FC869212

Overview
NameFC869212
Unique NameFC869212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length401
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 8.056e-50
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GKN KVIENSEG+RTTPSVVAF   GE LVG PAKRQA TNP  T+F  KRLIGR+FDDP  +++  +V YKIV+  NGDAWVE  G++YSPSQI A +L KMKETAESYLG+ V +AVITVPAYFNDAQRQA
Sbjct:   21 GKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 8.056e-50
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GKN KVIENSEG+RTTPSVVAF   GE LVG PAKRQA TNP  T+F  KRLIGR+FDDP  +++  +V YKIV+  NGDAWVE  G++YSPSQI A +L KMKETAESYLG+ V +AVITVPAYFNDAQRQA
Sbjct:   21 GKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_RHILW (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.052e-49
Identity = 93/133 (69.92%), Postives = 111/133 (83.46%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GK+ KVIEN+EG+RTTPS+VAF+  GE LVG PAKRQA TNPTNTLF  KRLIGR+++DP  +++  +V + IV+  NGDAWVEANG+ YSP+QI A +L KMKETAESYLG+ V KAVITVPAYFNDAQRQA
Sbjct:   21 GKDAKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_RHIL3 (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.052e-49
Identity = 93/133 (69.92%), Postives = 111/133 (83.46%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GK+ KVIEN+EG+RTTPS+VAF+  GE LVG PAKRQA TNPTNTLF  KRLIGR+++DP  +++  +V + IV+  NGDAWVEANG+ YSP+QI A +L KMKETAESYLG+ V KAVITVPAYFNDAQRQA
Sbjct:   21 GKDAKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFTIVKGDNGDAWVEANGKGYSPAQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.052e-49
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            G  PKVIENSEG+RTTPS+VAF   GE LVG PAKRQA TNP  T F  KRLIGR +DDP TQ++  +V YKI R  NGDAWVEA+G++YSPSQI AF L KMKETAES+LG+ V++AVITVPAYFNDAQRQA
Sbjct:   21 GTQPKVIENSEGARTTPSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPMTQKDKGLVPYKIARGDNGDAWVEADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.052e-49
Identity = 93/133 (69.92%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GKN KVIENSEG RTTPS+VA    GE LVG PAKRQA TNP  T F  KRLIGR++DDP  +++ ++V YKIV+A NGDAWVEA+GQ YSPSQ+ AF+L KMKETAE++LG+ V +AVITVPAYFNDAQRQA
Sbjct:   21 GKNAKVIENSEGMRTTPSIVAVTDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADGQTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_BART1 (Chaperone protein dnaK OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.052e-49
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GKN KVIENSEG+RTTPSVVAF   GE LVG PAKRQA TNP  T+F  KRLIGR+FDDP  +++  +V YKIV+  NGDAWVE  G++YSPSQI A +L KMKETAESYLG+ V +AVITVPAYFNDAQRQA
Sbjct:   21 GKNAKVIENSEGARTTPSVVAFTDGGERLVGQPAKRQAVTNPEGTVFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGEKVEQAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: DNAK_MESSB (Chaperone protein dnaK OS=Mesorhizobium sp. (strain BNC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.374e-49
Identity = 93/133 (69.92%), Postives = 110/133 (82.71%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GK+ KVIEN+EG+RTTPS+VAF    E LVG PAKRQA TNP NT F  KRLIGR+F+DP  +++ ++V YKIV+A NGDAWVE++G +YSPSQI A +L KMKETAESYLG+ V KAVITVPAYFNDAQRQA
Sbjct:   21 GKDAKVIENAEGARTTPSIVAFTDSDERLVGQPAKRQAVTNPENTFFAIKRLIGRRFEDPMVEKDKKLVPYKIVKADNGDAWVESHGTKYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQA 153
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.795e-49
Identity = 95/133 (71.43%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GK PK+IEN+EG+RTTPSVVAF Q GE LVG  AKRQA  NP NTLF TKRLIGRKF D + QR+++ V YKIV+  NGDAWVEA G++YSP+QIG FVL KMKETAE+YL K V  AV+TVPAYFND+QRQA
Sbjct:   60 GKTPKIIENAEGARTTPSVVAFAQDGERLVGIAAKRQAVVNPENTLFATKRLIGRKFTDAEVQRDIKEVPYKIVQHTNGDAWVEARGEKYSPAQIGGFVLGKMKETAENYLSKPVKNAVVTVPAYFNDSQRQA 192
[Close]
BLAST of FC869212 vs. ExPASy Swiss-Prot
Match: GRP75_CHICK (Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.795e-49
Identity = 95/133 (71.43%), Postives = 110/133 (82.71%), Query Frame = 2 
Query:    2 GKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAATNPTNTLFGTKRLIGRKFDDPQTQREMQMVSYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQA 400
            GK  KV+ENSEG+RTTPSVVAF   GE LVG PAKRQA TNP NT + TKRLIGR+FDD + +++++ V +KIVRA NGDAWVEA+G+ YSPSQIGAFVL KMKETAE+YLG     AVITVPAYFND+QRQA
Sbjct:   74 GKQAKVLENSEGARTTPSVVAFTADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHPAKNAVITVPAYFNDSQRQA 206
The following BLAST results are available for this feature:
BLAST of FC869212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BARQU8.056e-5071.43Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARHE8.056e-5071.43Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_RHILW1.052e-4969.92Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIL31.052e-4969.92Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_METRJ1.052e-4971.43Chaperone protein dnaK OS=Methylobacterium radioto... [more]
DNAK_BRAJA1.052e-4969.92Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]
DNAK_BART11.052e-4971.43Chaperone protein dnaK OS=Bartonella tribocorum (s... [more]
DNAK_MESSB1.374e-4969.92Chaperone protein dnaK OS=Mesorhizobium sp. (strai... [more]
HSP7M_EMENI1.795e-4971.43Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
GRP75_CHICK1.795e-4971.43Stress-70 protein, mitochondrial OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionC31009G02EF AbioticL1 Citrus clementina cDNA clone C31009G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869212 ID=FC869212; Name=FC869212; organism=Citrus clementina; type=EST; length=401bp
GGGAAAGAACCCCAAAGTTATTGAGAACTCCGAAGGATCTAGGACTACAC
CATCAGTTGTAGCTTTCAATCAGAAGGGAGAGCTACTTGTGGGTACACCA
GCAAAGCGTCAGGCTGCGACCAACCCGACTAACACGCTCTTTGGCACCAA
GCGTTTAATTGGTAGAAAATTTGATGATCCCCAGACGCAAAGAGAAATGC
AGATGGTTTCATATAAGATAGTAAGGGCCCCCAATGGGGATGCTTGGGTT
GAAGCCAATGGGCAGCAGTACTCGCCAAGTCAGATTGGGGCCTTTGTTCT
GACCAAGATGAAAGAAACTGCAGAATCCTACCTTGGAAAGTCAGTTTCAA
AAGCAGTAATCACAGTTCCAGCTTATTTCAACGATGCTCAAAGGCAAGCT
A
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