FC869221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM1 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain NATL1A) GN=rplJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 41/129 (31.78%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGAL 678 L+N + + YKG + K+ DLR L ++ + V KNTL+ +AI+G W L ++G NA++ + + + +A+K + FQKE + E G +FEGK + + KA+ +P++ + + GAL Sbjct: 19 LDNSEMALVLDYKGLSTKEMSDLRSRLQQSDGVCKVTKNTLMRQAIKGKNSWTGLDSLLTGTNAFVLIKGD-VGSAVKAVQAFQKETQKSETK--GGLFEGKLLSQDEIKAIAKLPSKEALMGQIAGAL 144
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_GLOVI (50S ribosomal protein L10 OS=Gloeobacter violaceus GN=rplJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 42/129 (32.56%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENT-KLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQ 681 LE ++ I Y+G +V + LRR + E+ +VAKNTL+ A T W + P ++G +A+LF E++ +K Y +F +E K + +F GAV +G KA+ +P + + A+ GAL+ Sbjct: 18 LEKSSVVMVIDYRGLSVAEITGLRRRMREHGGTCVVAKNTLMGVATRETAWRNIDPLLAGPSAFLF-GNEKLKEMLKTYEDFARETK--KTEFRGAVVDGTLVTLDGLKAIADLPPKEVLLAQFAGALK 143
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_SYNS3 (50S ribosomal protein L10 OS=Synechococcus sp. (strain CC9311) GN=rplJ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 40/129 (31.01%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGAL 678 L + + Y+G ++K+ DLR L + + V KNTL+ +AI+G W +L ++G NA++ + + + A+K ++FQKE K E G +FEGK + + KA+ +P++ + A+ GA+ Sbjct: 19 LGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRRAIDGDSVWSSLDSLLNGTNAFVLIKGD-VGGAVKAVQSFQKETKKSETK--GGLFEGKLLSQDEIKAIGELPSKEVLMAQIAGAI 144
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_CYAP4 (50S ribosomal protein L10 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplJ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L L I YKG TV + DLR+ L P T V KN + A++G Q W+ L+ +A+L V +++ AIK Y++FQK K + + G V EG+ KA+ +P++ ++ A+ GA+ G A Sbjct: 19 LSQSQLTLVIDYKGLTVAEITDLRKRLRPTGTLCKVTKNAFMRIAVDGNQTWQPLQSFCQETSAFLLVK-DDLGGAIKAYQDFQKATK--KTELRGGVMEGRSLNADQVKAIGDLPSKDQLMAQIAGAINGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROMM (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplJ PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEGT-QWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L + + Y+G ++K+ DLR L + + V KNTL+ AI G W L+ ++G NA++ + + + A+K + FQK+ K E G +FEGK + G+ KA+ +PT+ + A+ G+L A Sbjct: 19 LGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRHAINGNGAWSNLESLLTGTNAFVLIKGD-VGGAVKAVQAFQKDTKKSETK--GGLFEGKLLSQGEIKAIGDLPTKEVLMAQIAGSLNALA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM3 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplJ PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEGT-QWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L + + Y+G ++K+ DLR L + + V KNTL+ AI G W L+ ++G NA++ + + + A+K + FQK+ K E G +FEGK + G+ KA+ +PT+ + A+ G+L A Sbjct: 19 LGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRHAINGNGAWSNLESLLTGTNAFVLIKGD-VGGAVKAVQAFQKDTKKSETK--GGLFEGKLLSQGEIKAIGDLPTKEVLMAQIAGSLNALA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_MICAN (50S ribosomal protein L10 OS=Microcystis aeruginosa (strain NIES-843) GN=rplJ PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 48/137 (35.04%), Postives = 72/137 (52.55%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAI-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVF----EGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L L I Y+G TV + +LRR L P T V KNTL+ AI E + WE +K +SG +A+L V E+I A K Y+ F+KE K + + G V +G+ KA+ +P++ ++ A+ GA+ A Sbjct: 19 LSEAQLTMVIDYQGLTVAEISNLRRKLRPTGTICKVTKNTLMGLAIAEDSGWEPMKSLLSGTSAFLLV-KEDIGGAFKAYQEFKKESK--KTELRGGVLKEGTKGQLLTEEQLKAIADLPSKEQLIAQVAGAINAIA 152
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_SYNP6 (50S ribosomal protein L10 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplJ PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLP-ENTKLIVAKNTLVYKAI-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 ++ + + Y+G TV + DLR L N+ V KNTL+ +AI + W+ L + G NA++ V ++ +AIK Y+ FQK+ K + + G + EG+ + + KA+ +P++ + A+ GA+ G A Sbjct: 19 VDEAQMAFVVDYQGLTVAEITDLRNRLEASNSVCKVTKNTLMRRAIADADDWQPLTELLKGTNAFVLVK-DDPGSAIKAYQAFQKDTK--KTELRGGLLEGRLLSSDELKAIGDLPSKEVLIAQIAGAINGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_SYNE7 (50S ribosomal protein L10 OS=Synechococcus elongatus (strain PCC 7942) GN=rplJ PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLP-ENTKLIVAKNTLVYKAI-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 ++ + + Y+G TV + DLR L N+ V KNTL+ +AI + W+ L + G NA++ V ++ +AIK Y+ FQK+ K + + G + EG+ + + KA+ +P++ + A+ GA+ G A Sbjct: 19 VDEAQMAFVVDYQGLTVAEITDLRNRLEASNSVCKVTKNTLMRRAIADADDWQPLTELLKGTNAFVLVK-DDPGSAIKAYQAFQKDTK--KTELRGGLLEGRLLSSDELKAIGDLPSKEVLIAQIAGAINGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_SYNY3 (50S ribosomal protein L10 OS=Synechocystis sp. (strain PCC 6803) GN=rplJ PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11 Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 301 ENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEGTQ-WEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 ++ + I Y+G TV + DLR L P +AKNTLV +A+ G + W ++ ++G A + V E++ AIK Y+ FQK+ K + + G V EGK D +A+ +P++ ++ + G + A Sbjct: 20 QDAQMTVIIDYQGLTVAEITDLRNRLRPLGGTCKIAKNTLVRRALAGQEAWSPMEEFLTGTTA-ILVLKEDLGGAIKAYKKFQKDTK--KTELRGGVLEGKSLTQADVEAIGDLPSKEQLMGQIAGGINALA 148 The following BLAST results are available for this feature:
BLAST of FC869221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869221 ID=FC869221; Name=FC869221; organism=Citrus clementina; type=EST; length=693bpback to top |