FC869224

Overview
NameFC869224
Unique NameFC869224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length633
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 6.121e-92
Identity = 155/203 (76.35%), Postives = 183/203 (90.15%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+T G I+ C+AAVAWEAGKPL+I++VEVAPP+  EVR+KI +TSLC TD+YFWE+KGQTPLFPRIFGHEA G+VES+GEGV+ L+ GDH LPVFTGECG+C HC+S+ SNMCDLLRIN+ RGVML D +SRFSI G+PV+HF+GTSTFSEYTVVH+GCVAKINP APLDKVCILSCG+ TGLGAT+NVAKP+ GSSVA+FG
Sbjct:    1 MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.326e-91
Identity = 153/203 (75.37%), Postives = 184/203 (90.64%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+TAG ++ C+AAVAWEAGKPL+I++VEVAPP+  EVR+KI +TSLC TD+YFWE+KGQTPLFPRIFGHEA G+VES+GEGV+ L+ GDH LPVFTGECG+C HC+S+ SNMC+LLRIN+ RGVM+ D +SRFSI G+PV+HF+GTSTFSEYTVVH+GCVAKINP APLDKVCILSCG+ TGLGAT+NVAKP+ GSSVA+FG
Sbjct:    1 MSNTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.326e-91
Identity = 152/201 (75.62%), Postives = 182/201 (90.55%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL I++VEVAPP+ MEVR+KI +TSLC TD+YFWE+KGQTP+FPRIFGHEA G++ES+GEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN+ RGVM+ADG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG STGLGA++NVAKP +GS+VAVFG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.038e-91
Identity = 151/201 (75.12%), Postives = 182/201 (90.55%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL I++VEVAPP+ MEVR+KI YT+LC TD+YFWE+KGQTP+FPRI GHEA G+VES+GEGV++L  GDHVLPVFTGEC DC HC+S+ SN+CDLLRIN  RGVM+ DGQSRF+ING+P+ HF+GTSTFSEYTV+H GC+AKINP APLDKVC+LSCG+STGLGATLNVAKP++GS+VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 330.487 bits (846), Expect = 4.387e-90
Identity = 151/203 (74.38%), Postives = 180/203 (88.67%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MSST G ++ C+AAVAWEAGKPL+I++VEVAPP+   VR+KI YTSLC TD+YFWE+KGQ PLFPRI+GHEA G+VES+GEGV+DL+ GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN+ RGVML DG+SRFSI G+P+ HF+GTSTFS YTV H GC+AKINP +PLDKVCILSCG+STGLGATLNV KP++GS+VAVFG
Sbjct:    1 MSSTEGKVICCRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 7.483e-90
Identity = 149/201 (74.13%), Postives = 180/201 (89.55%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ C+AAV WEAGKPL I++VEVAPP+ MEVRIKI YT+LC TD+YFWE+KGQTP+FPRI GHEA G+VES+GEGV+D+  GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN  RGVM+ DG+SRF+I+G+P+ HF+GTSTFSEYTV+H GC+AKINP APLDKVCILSCG+STGLGATLNVAKP +GS+VA+FG
Sbjct:    2 ATAGKVIKCRAAVTWEAGKPLSIEEVEVAPPQAMEVRIKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECAHCKSEESNMCDLLRINVDRGVMIGDGKSRFTISGQPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGISTGLGATLNVAKPAKGSTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.276e-89
Identity = 148/201 (73.63%), Postives = 180/201 (89.55%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL +++VEVAPP+ MEVR+KI +TSLC TD+YFWE+KGQ P+FPRIFGHEA G+VES+GEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN+ RGVM+ DG+SRFSI G+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGA++NVAKP +GS+VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQIPMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 1.411e-88
Identity = 147/201 (73.13%), Postives = 178/201 (88.56%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL I++VEVAPP+ MEVR+KI YT+LC TD+YFWE+KGQTP+FPRI GHEA G+VES+GEGV++L  GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN  RGVM+ DG+SRF+I G+P+ HF+GTSTFSEYTV+H GC+AKINP APLDKVCILSCG STG GAT+NVAKP++G +VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.411e-88
Identity = 147/201 (73.13%), Postives = 178/201 (88.56%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL I++VEVAPP+ MEVR+KI YT+LC TD+YFWE+KGQTP+FPRI GHEA G+VES+GEGV++L  GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN  RGVM+ DG+SRF+I G+P+ HF+GTSTFSEYTV+H GC+AKINP APLDKVCILSCG STG GAT+NVAKP++G +VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.253e-86
Identity = 145/201 (72.14%), Postives = 176/201 (87.56%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL +++VE APP+ MEVR KI YT+LC TD+YFWE+ GQTP+FPRI GHEA G+VES+GEGV++L  GDHVLPVFTGEC +C HC S+ SN+CDLLRIN  RGVM+ DGQSRF+I+G+P+ HFLGTSTFSEYTV+H GCVAKI+P APLDKVC+LSCG+STGLGATLNV KP++G +VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLSMEEVEDAPPQAMEVRDKILYTALCHTDVYFWEANGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKECAHCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIFG 202          
The following BLAST results are available for this feature:
BLAST of FC869224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ADH1_PEA6.121e-9276.35Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_TRIRP2.326e-9175.37Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_MAIZE2.326e-9175.62Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH3_HORVU3.038e-9175.12Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH_FRAAN4.387e-9074.38Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_MAIZE7.483e-9074.13Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH1_HORVU1.276e-8973.63Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH2_ORYSJ1.411e-8873.13Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI1.411e-8873.13Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH2_HORVU2.253e-8672.14Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]

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Properties
Property NameValue
Genbank descriptionC31009H03EF AbioticL1 Citrus clementina cDNA clone C31009H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869224 ID=FC869224; Name=FC869224; organism=Citrus clementina; type=EST; length=633bp
ATTCTCATTGGGAACCTCACCAATGTCGAGCACTGCTGGTCTTATTCTTA
CCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGCCGCTGATCATTCAG
GATGTGGAGGTTGCTCCTCCAAAGACCATGGAAGTGAGGATCAAGATCAA
ATACACCTCTCTTTGCCGCACTGATCTCTATTTCTGGGAGTCCAAGGGTC
AGACACCCTTGTTTCCTCGCATATTTGGGCATGAAGCAGCAGGGGTTGTG
GAAAGTCTTGGGGAAGGTGTTTCAGACCTTGAAGTAGGGGATCATGTACT
CCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACACTGCAGGTCCGATG
TAAGCAATATGTGTGACCTTTTGAGAATAAACTCAGTCAGGGGAGTCATG
CTTGCTGATGGACAATCTAGGTTTTCGATCAATGGGGAGCCTGTAAATCA
CTTCCTTGGAACATCCACCTTTAGCGAGTACACTGTCGTTCATTCAGGCT
GCGTTGCAAAGATCAATCCTCTGGCACCTTTGGATAAAGTCTGCATTCTC
AGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTAAATGTGGCAAAACC
TGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCT
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