FC869224

Overview
NameFC869224
Unique NameFC869224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length633
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHB_MYCTU (Alcohol dehydrogenase B OS=Mycobacterium tuberculosis GN=adhB PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.873e-32
Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 2
Query:   56 KAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPL--FPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            K A+ WE  +P  ++++E+  P+  EV+I+++   +CR+D +     G  P+  FP + GHE AG+V  +G GV D   GDHV+  F   CG C  C++ + N+CDL     + G  + DG  R    G+ V       TFS Y VVH   V KI+P  P +  C++ CGV+TG G+ +  A    G  VA+ G
Sbjct:    4 KGALIWEFNQPWSVEEIEIGDPRKDEVKIQMEAAGMCRSDHHL--VTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDL-GAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVG 194          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHB_MYCBO (Alcohol dehydrogenase B OS=Mycobacterium bovis GN=adhB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.873e-32
Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 2
Query:   56 KAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPL--FPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            K A+ WE  +P  ++++E+  P+  EV+I+++   +CR+D +     G  P+  FP + GHE AG+V  +G GV D   GDHV+  F   CG C  C++ + N+CDL     + G  + DG  R    G+ V       TFS Y VVH   V KI+P  P +  C++ CGV+TG G+ +  A    G  VA+ G
Sbjct:    4 KGALIWEFNQPWSVEEIEIGDPRKDEVKIQMEAAGMCRSDHHL--VTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDL-GAGLLAGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVG 194          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.469e-26
Identity = 69/194 (35.57%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   50 TCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            T +  +A   G P+ + D+ +  P   EV   I   ++C TDL + E  G    FP + GHEAAG VES+GEGV  ++ GD+V+  +   CG CR C+      C     N+ + + L DG          +   LG   F++ T+VH+G   K++P A      +L CGV  GLGA +N     RG SVAV G
Sbjct:    3 TVRGVIARSKGAPVELTDIVIPDPGPSEVTALIATCAVCHTDLTYREG-GINDEFPFLLGHEAAGTVESVGEGVDSVQPGDYVVLNWRAVCGQCRACKRGRPQYC-FSTFNATQKMTLTDGTE--------LTPALGIGAFADKTLVHAGQCTKVDPAADPAVAGLLGCGVMAGLGAAVNTGAVSRGDSVAVIG 186          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: XYLB_PSEPU (Aryl-alcohol dehydrogenase OS=Pseudomonas putida GN=xylB PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.915e-22
Identity = 63/193 (32.64%), Postives = 94/193 (48.70%), Query Frame = 2
Query:   56 KAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVN-HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            KAA+  +   P +++ V +  P   +V +++  T LC TDL   +     PL P +FGHE AGVVE +G  V  ++ GDHV+  F   CG C  C S     C      +  G  +    +     G  V   F G S+F+ Y + +     K+    PL+ +  L CG+ TG G+ LN   P  GS++A+FG
Sbjct:    4 KAAIVRQKNGPFLLEHVALNEPAEDQVLVRLVATGLCHTDLVCRDQHYPVPL-PMVFGHEGAGVVERVGSAVKKVQPGDHVVLTFY-TCGSCDACLSGDPTSCANSFGPNFMGRSVTGECTIHDHQGAEVGASFFGQSSFATYALSYERNTVKVTKDVPLELLGPLGCGIQTGAGSVLNALNPPAGSAIAIFG 194          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.907e-15
Identity = 56/194 (28.87%), Postives = 89/194 (45.88%), Query Frame = 2
Query:   59 AAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESLGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            A VA + G PL+ + + V  P   ++ +KI+Y+ +C TDL+        P+  P + GHE AG+V + GE V + E+GD   +    G CG+C  CR     +C                 +R  ++G  V+      TF +Y +  +   +KI    PLD    +L  G++   G  L  A    G +VA+ G
Sbjct:    9 AQVAEKVGGPLVYKQIPVPKPGPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLC-----------------ARAQLSGYTVD-----GTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKG--LKEAGVRPGQTVAIVG 178          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.907e-15
Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 2
Query:   59 AAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESLGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            A VA + G PLI + + V  P   E+ +K++Y+ +C TDL+    KG  PL    P + GHE AGVV + G+ V++ E+GDH  L    G C  C  C+     +C                    S++G  V+      TF +Y +  +   +K+    PLD V  +L  G++   G   +  +P  G +VA+ G
Sbjct:    9 AQVAEQKGGPLIYKQIPVPKPGPDEILVKVRYSGVCHTDLH--ALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLC-----------------PNASLSGYTVD-----GTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGVRP--GQTVAIVG 178          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.761e-14
Identity = 61/198 (30.81%), Postives = 92/198 (46.46%), Query Frame = 2
Query:   56 KAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFG 631
            KAAV  +  KPL +++VE       EV ++IK   +C TDL+     W  K + PL P   GHE  GV+E +G GV+ L+VGD V +P     CG C +C S    +C+                + +S++G           ++EY    +  V KI      ++   + C GV+T     +  AKP  G  VA++G
Sbjct:    2 KAAVVEQFKKPLQVKEVEKPKISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP---GHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE------------RQQNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKP--GEWVAIYG 172          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.301e-14
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 2
Query:   50 TCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESLGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMC 364
            T KA +    G PL+ +D+ V  PK  E+ I +KY+ +C TDL+ W  KG  PL    P + GHE AGVV +LGE V+  E+GD+  +    G C  C +C +   + C
Sbjct:    6 TQKAVIFETNGGPLLYKDIPVPKPKPNELLINVKYSGVCHTDLHAW--KGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNC 112          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14
Identity = 61/198 (30.81%), Postives = 93/198 (46.97%), Query Frame = 2
Query:   56 KAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFG 631
            KAAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P   GHE  G+VE +G GV+ L+VGD V +P     CG C +C S    +C+  +             + +S++G           ++EY    +  V KI      ++   + C GV+T     +  AKP  G  VA++G
Sbjct:    2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP---GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQK------------NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKP--GEWVAIYG 172          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 2
Query:   56 KAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            KAAV  E  K L I++VE    +  EV +KI+   +C TDL+     W  K + PL P   GHE  G+V  + +GV  ++VGD V +P     CG+C +C +    +C     + + G    DG                   ++EY    +  VAKI + L P++   IL  GV+T     ++ A+P  G  VA++G
Sbjct:    2 KAAVVNEFKKALEIKEVERPKLEEGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIP---GHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCP----HQLNGGYSVDG------------------GYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSGARP--GEWVAIYG 172          
The following BLAST results are available for this feature:
BLAST of FC869224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ADHB_MYCTU1.873e-3236.08Alcohol dehydrogenase B OS=Mycobacterium tuberculo... [more]
ADHB_MYCBO1.873e-3236.08Alcohol dehydrogenase B OS=Mycobacterium bovis GN=... [more]
FADH_AMYME4.469e-2635.57NAD/mycothiol-dependent formaldehyde dehydrogenase... [more]
XYLB_PSEPU3.915e-2232.64Aryl-alcohol dehydrogenase OS=Pseudomonas putida G... [more]
ADH1_EMENI7.907e-1528.87Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH1_ASPFN7.907e-1530.10Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH1_BACST1.761e-1430.81Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH2_PICST2.301e-1439.45Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH3_BACST3.924e-1430.81Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH2_BACST3.924e-1431.31Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]

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Properties
Property NameValue
Genbank descriptionC31009H03EF AbioticL1 Citrus clementina cDNA clone C31009H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869224 ID=FC869224; Name=FC869224; organism=Citrus clementina; type=EST; length=633bp
ATTCTCATTGGGAACCTCACCAATGTCGAGCACTGCTGGTCTTATTCTTA
CCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGCCGCTGATCATTCAG
GATGTGGAGGTTGCTCCTCCAAAGACCATGGAAGTGAGGATCAAGATCAA
ATACACCTCTCTTTGCCGCACTGATCTCTATTTCTGGGAGTCCAAGGGTC
AGACACCCTTGTTTCCTCGCATATTTGGGCATGAAGCAGCAGGGGTTGTG
GAAAGTCTTGGGGAAGGTGTTTCAGACCTTGAAGTAGGGGATCATGTACT
CCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACACTGCAGGTCCGATG
TAAGCAATATGTGTGACCTTTTGAGAATAAACTCAGTCAGGGGAGTCATG
CTTGCTGATGGACAATCTAGGTTTTCGATCAATGGGGAGCCTGTAAATCA
CTTCCTTGGAACATCCACCTTTAGCGAGTACACTGTCGTTCATTCAGGCT
GCGTTGCAAAGATCAATCCTCTGGCACCTTTGGATAAAGTCTGCATTCTC
AGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTAAATGTGGCAAAACC
TGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCT
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