FC869224

Overview
NameFC869224
Unique NameFC869224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length633
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.054e-59
Identity = 111/199 (55.78%), Postives = 144/199 (72.36%), Query Frame = 2
Query:   35 AGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            A  ++ CKAAVAWEAGKPL I++VEVAPPK  EVRIKI  T++C TD Y          +P I GHE AG+VES+GEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA LN AK E GS+ AVFG
Sbjct:    2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFG 199          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 228.024 bits (580), Expect = 3.066e-59
Identity = 110/199 (55.28%), Postives = 143/199 (71.86%), Query Frame = 2
Query:   35 AGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            A  ++ CKAAVAWEAGKPL I+++EVAPPK  EVRIKI  T++C TD Y          FP I GHE AG+VES+GEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA +N AK E GS  AVFG
Sbjct:    2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG 199          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 228.024 bits (580), Expect = 3.066e-59
Identity = 108/203 (53.20%), Postives = 144/203 (70.94%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+T G ++TCKAAVAWEA KPL+I+D+EVAPPK  EVRIKI  T +C TD +         LFP + GHE AG+VES+GEGV++ + GDHV+ ++  +C +C+ C+S  +N+C  +R+    GVM  +G SR S  G+ + HF+GTSTF+EYTVV    + KIN  APL+KVC+L CG+STG GA LN AK E GS+ AV+G
Sbjct:    1 MSATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVM-PEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.831e-59
Identity = 107/201 (53.23%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL +++VEVAPP+  EVRIK+  T +C TD Y          FP I GHE AG+VES+GEGV+  + GD V+P++  +CG+C+ C++  +N+C  +R+   RG+M  D  SRF+  G+ + HF+GTSTFSEYTVV    +A ++P APLDKVC+L CG+STG GA LN AK E GS+ AVFG
Sbjct:    1 ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFG 200          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 8.922e-59
Identity = 109/196 (55.61%), Postives = 142/196 (72.45%), Query Frame = 2
Query:   44 ILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ++ CKAAVAWEAGKP+ I++VEVAPPK  EVRIKI  T++C TD Y          FP I GHE AG+VES+GEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R    +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CGVSTG GA +N AK E GS+ A+FG
Sbjct:    5 VIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFG 199          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.988e-58
Identity = 106/203 (52.22%), Postives = 143/203 (70.44%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MSSTAG ++ CKAAVAW A  PL I+ ++VAPPK  EVR+KI YT++C TD Y  +      LFP + GHE +G+VES+GEGV+    GDHV+P++  +C +C +C++  +N+C  +RI+   G M  DG SRF+ NG+ + HF+G STFSEYTVV    + K+NP APL+KV +L CG+STG GA LN  K E GS+VAV+G
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFM-PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.988e-58
Identity = 106/213 (49.77%), Postives = 147/213 (69.01%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTP-LFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSI---------NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            M+ T G ++TCKAAV W    PL+IQ++ V PP+ MEVR+KI Y+S+C TDL  W    +    FPRI GHEA G+VES+GEGV D++ GD+V+P F GECG+C+ C+ + SN+C+   ++ ++ VM+ DG +RFS            +P+ HFL TSTF+EYTV+ S CV KI+P +PL ++ +LSCGVSTG+GA  N+A  + G S AVFG
Sbjct:    1 MAETQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFG 213          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.428e-58
Identity = 109/196 (55.61%), Postives = 139/196 (70.92%), Query Frame = 2
Query:   44 ILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ++ CKAAVAWEAGKPL I+++EVAPPK  EVR+KI  T++C TD Y          FP I GHE AG+VES+GEGV+  + GD V+P++  +CG+C+ C +  +N+C  +R+   +GVM  DG SRF+  G+ V HF+GTSTFSEYTVV    + KIN  APLDKVC+L CGVSTG GA LN AK E GS+ AVFG
Sbjct:    4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFG 198          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.428e-58
Identity = 109/200 (54.50%), Postives = 140/200 (70.00%), Query Frame = 2
Query:   32 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            TAG ++ CKAAVAWE GKPL I++VEVAPP   EVRIK+  T +C TD Y         LFP I GHE AG VES+GEGV+  + GD V+P++  +CG+C+ C++  +N+C  +RI   +G +L D  SRF+  G+ V HF+GTSTFSEYTVV    +AK+N  AP+DKVC+L CG+STG GA LN AK E GS+ AVFG
Sbjct:    3 TAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFG 201          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.864e-58
Identity = 105/201 (52.24%), Postives = 139/201 (69.15%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ST G ++TCKAAVAWEA KPL+I+D+EV PP+  EVRIKI YT +C TD Y         +FP I GHE  G+VES+GEGV+ ++VGDHV+P++  ECG C+ C S+ +N+C  +RI   +G M  DG +RF   G+ + HF+GTSTFS+YTV+       +   APLDKVC+L CG++TG GA    AK E GS+VA+FG
Sbjct:    2 STEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQM-PDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFG 201          
The following BLAST results are available for this feature:
BLAST of FC869224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ADHX_BOVIN1.054e-5955.78Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_HUMAN3.066e-5955.28Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_DROME3.066e-5953.20Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHH_GADMO6.831e-5953.23Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_HORSE8.922e-5955.61Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_CAEEL1.988e-5852.22Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHL3_ARATH1.988e-5849.77Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_UROHA4.428e-5855.61Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_SPAAU4.428e-5854.50Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_DICDI9.864e-5852.24Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]

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Properties
Property NameValue
Genbank descriptionC31009H03EF AbioticL1 Citrus clementina cDNA clone C31009H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869224 ID=FC869224; Name=FC869224; organism=Citrus clementina; type=EST; length=633bp
ATTCTCATTGGGAACCTCACCAATGTCGAGCACTGCTGGTCTTATTCTTA
CCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGCCGCTGATCATTCAG
GATGTGGAGGTTGCTCCTCCAAAGACCATGGAAGTGAGGATCAAGATCAA
ATACACCTCTCTTTGCCGCACTGATCTCTATTTCTGGGAGTCCAAGGGTC
AGACACCCTTGTTTCCTCGCATATTTGGGCATGAAGCAGCAGGGGTTGTG
GAAAGTCTTGGGGAAGGTGTTTCAGACCTTGAAGTAGGGGATCATGTACT
CCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACACTGCAGGTCCGATG
TAAGCAATATGTGTGACCTTTTGAGAATAAACTCAGTCAGGGGAGTCATG
CTTGCTGATGGACAATCTAGGTTTTCGATCAATGGGGAGCCTGTAAATCA
CTTCCTTGGAACATCCACCTTTAGCGAGTACACTGTCGTTCATTCAGGCT
GCGTTGCAAAGATCAATCCTCTGGCACCTTTGGATAAAGTCTGCATTCTC
AGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTAAATGTGGCAAAACC
TGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCT
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