FC869224

Overview
NameFC869224
Unique NameFC869224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length633
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.870e-57
Identity = 104/201 (51.74%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +T G  + C+AAVAWEAGKPL +++VEVAPP+  EVRIKI  T +C TD Y         +FP + GHE AG+VES+GEGV+  + GD V+P++  +CG+C+ C++  +N+C  +R+   +G+M  +G SRFS NG+ + HF+G+STFSEYTVV    +AK++  APLDKVC+L C +STG GA LN AK E GS+ AVFG
Sbjct:    1 ATVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLM-PNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVEAGSTCAVFG 200          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.895e-57
Identity = 109/201 (54.23%), Postives = 141/201 (70.15%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            STAG ++ CKAA+AWE  KPL I+ +EVAPPK  EVRIKI  T +CR+D +      + PL P + GHEAAGVVES+GEGV+ ++ GD V+P+F  +CG CR C+S   N+C    +NS  G+M  DG SRF+  G+ ++HF+ TSTF+EYTVVH   V KI+P APL+KVC++ CG STG GA +  AK E GS  AVFG
Sbjct:    1 STAGKVIKCKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLM-PDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVEPGSICAVFG 199          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 1.424e-56
Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            STAG ++ CKAAV WE  KP  I+DVEVAPPK  EVRIK+    +CRTD +       TPL P I GHEAAG+VES+GEGV+ ++ GD V+P+FT +CG CR C++  SN C    + + RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK   GS+ AVFG
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFG 200          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.430e-56
Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            STAG ++ CKAAV WE  KP  I+DVEVAPPK  EVRIK+    +CRTD +       TPL P I GHEAAG+VES+GEGV+ ++ GD V+P+FT +CG CR C++  SN C    + + RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK   GS+ AVFG
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFG 200          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.173e-56
Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ST G  +TCKAAVAWEA KPL I+DV VAPPK  EVRIK+  T +C TD Y          FP I GHE AG+VES+GEGV++++VGDHV+ ++T ECG+C+ C+S  +N+C  +R    +GVM  DG SRF+  G+ + HF+G STFS+YTVV    V  INP A  DK C+L CG++TG GA    A  ++G +VAVFG
Sbjct:    4 STVGKPITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVM-PDGTSRFTCKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQKGDNVAVFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.575e-55
Identity = 101/206 (49.03%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVR-----GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +T G ++ CKAA+AWEAGKPL ++++EV+PPK  EVR+KI  T +CRTD +      +  +FP I GHE AG+VES+G+GVS  + GD V+P++  +CG C+ C +  +N+C+  +I+ ++       +++DG SRF+  G+P+ HF+GTSTFSEYTVV    +AKI+  APLDKVC++ CG STG GA +N A+ E GS+ AVFG
Sbjct:    1 TTEGKVIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKVIPLYMPQCGHCKFCLNPKTNLCE--KISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFG 204          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.575e-55
Identity = 108/201 (53.73%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            STAG ++ CKAAV WE  KP  I+DVEVAPPK  EVRIK+    +CRTD +       +PL P I GHEAAG+VES+GEGV+ ++ GD V+P+FT +CG CR C+S   N C    +++ RG  L DG  RF+  G+P++HF+GTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG G+ +NVAK   GS  AVFG
Sbjct:    2 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGT-LQDGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFG 200          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.057e-55
Identity = 97/129 (75.19%), Postives = 117/129 (90.70%), Query Frame = 2
Query:  245 VVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ++ES+GEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN+ RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGA++NVAKP +GS+VAVFG
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFG 129          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.057e-55
Identity = 108/201 (53.73%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            STAG ++ CKAAV WEA KP  +++VEVAPPK  EVRIKI  T +CR+D +        P FP I GHEAAGVVES+GE V+ L+ GD V+P+F  +CG+CR C S   N+C    ++S    ++ADG +RF+  G+ ++HF+GTSTF+EYTVVH    AKI+  APL+KVC++ CG STG GA L  AK E GS+ AVFG
Sbjct:    1 STAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVFG 200          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.686e-55
Identity = 106/201 (52.74%), Postives = 139/201 (69.15%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ST G ++ CKAAV WEA KP  +++VEVAPPK  EVRIKI  T +CR+D +        P FP I GHEAAGV+ES+GE V+ L+ GD V+P+F  +CG+CR C S   N+C    ++S    ++ADG +RF+  G+ ++HF+GTSTF+EYTVVH    AKI+  APL+KVC++ CG STG GA L  AK E GS+ AVFG
Sbjct:    2 STVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVFG 201          
The following BLAST results are available for this feature:
BLAST of FC869224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ADHL_GADMO2.870e-5751.74Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH1_NAJNA4.895e-5754.23Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1B_PANTR1.424e-5654.73Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN2.430e-5654.73Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
FADH_CANMA3.173e-5652.74S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH4_STRCA1.575e-5549.03Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_PAPHA1.575e-5553.73Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1_ZEALU2.057e-5575.19Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH1_COTJA2.057e-5553.73Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_CHICK2.686e-5552.74Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]

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Properties
Property NameValue
Genbank descriptionC31009H03EF AbioticL1 Citrus clementina cDNA clone C31009H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869224 ID=FC869224; Name=FC869224; organism=Citrus clementina; type=EST; length=633bp
ATTCTCATTGGGAACCTCACCAATGTCGAGCACTGCTGGTCTTATTCTTA
CCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGCCGCTGATCATTCAG
GATGTGGAGGTTGCTCCTCCAAAGACCATGGAAGTGAGGATCAAGATCAA
ATACACCTCTCTTTGCCGCACTGATCTCTATTTCTGGGAGTCCAAGGGTC
AGACACCCTTGTTTCCTCGCATATTTGGGCATGAAGCAGCAGGGGTTGTG
GAAAGTCTTGGGGAAGGTGTTTCAGACCTTGAAGTAGGGGATCATGTACT
CCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACACTGCAGGTCCGATG
TAAGCAATATGTGTGACCTTTTGAGAATAAACTCAGTCAGGGGAGTCATG
CTTGCTGATGGACAATCTAGGTTTTCGATCAATGGGGAGCCTGTAAATCA
CTTCCTTGGAACATCCACCTTTAGCGAGTACACTGTCGTTCATTCAGGCT
GCGTTGCAAAGATCAATCCTCTGGCACCTTTGGATAAAGTCTGCATTCTC
AGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTAAATGTGGCAAAACC
TGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCT
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