FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEA6 (Porphobilinogen deaminase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemC PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24 Identity = 63/132 (47.73%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +IRI TR S LA+ QA + KL+ HP+L +++V + T GD+IL PLA IGGKGLF KE++ A+ + DIAVHSMKDVP P L C +RE+ DAF+ P G+IVGT+SLRR Sbjct: 5 VIRIATRKSALAMWQAEYVQAKLLEAHPQLK----VELVPMSTQGDRILDTPLAKIGGKGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEELPQGAIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_EUBE2 (Porphobilinogen deaminase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=hemC PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24 Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 336 RIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYSI 743 RIGTRGS LAL Q+ + ++ +PE ++VIIKTTGDK+ +PLA IG KG F KEI+EAL++ ID+AVHSMKD+P +RED RD I P+G+++GT SLRR+ + ++ Sbjct: 4 RIGTRGSKLALVQSEYVKRRMEEAYPE----DTFELVIIKTTGDKVTDKPLAAIGTKGFFVKEIEEALLSGSIDMAVHSMKDMPAECAAGLTFAKAWKREDCRDVLILKTAGSFSELPSGAVIGTGSLRRACQLAM 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ACIBL (Porphobilinogen deaminase OS=Acidobacteria bacterium (strain Ellin345) GN=hemC PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24 Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = 3 Query: 324 VAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +A +RIG+RGS LAL QA N + AL E E +++ IIKTTGDKIL LA +G KG+FTKEI+EAL ++D+AVHS+KD+PT LP+ L +RE+ RD F+ P G+ VGT+SLRR Sbjct: 1 MATLRIGSRGSQLALWQA----NHISALLRERGHE--VELEIIKTTGDKILDVALAKVGTKGMFTKEIEEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQGAKVGTSSLRR 128
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PECCP (Porphobilinogen deaminase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=hemC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 65/132 (49.24%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QA + L L+P+L +++V + T GD IL PLA +GGKGLF KE++ AL+ + DIAVHSMKDVP P+ L +R+D RDAF+ P GS VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQARYVQQCLNHLYPDLH----VELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_IDILO (Porphobilinogen deaminase OS=Idiomarina loihiensis GN=hemC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 63/141 (44.68%), Postives = 82/141 (58.16%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYSIDIHH 755 +RI TR S LAL QA + +L LHP L+ +++V + T GD IL PLA IGGKGLF KE++ A++ + DIAVHSMKD+P P L +RED RDAF+ P G++VGT SLRR + H Sbjct: 5 VRIATRKSKLALWQAEHIQQRLEELHPGLS----VELVPMSTKGDVILDTPLAKIGGKGLFVKELEVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGAVVGTCSLRRRCQVKEQFPH 141
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HELPY (Porphobilinogen deaminase OS=Helicobacter pylori GN=hemC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYSI 743 IG+RGS LAL QA+ + +L E E IQIV KT GDKIL PL IGGKGLFTKE++E L+ ID+AVHS+KDVP + L C +R DVRD F+ P G+ VGT SLRRS++ + Sbjct: 6 IGSRGSELALWQANHIKERLKK---ECLIESEIQIV--KTKGDKILDTPLNKIGGKGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQIKL 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HELP2 (Porphobilinogen deaminase OS=Helicobacter pylori (strain P12) GN=hemC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYSI 743 IG+RGS LAL QA+ + +L E E IQIV KT GDKIL PL IGGKGLFTKE++E L+ ID+AVHS+KDVP + L C +R DVRD F+ P G+ VGT SLRRS++ + Sbjct: 6 IGSRGSELALWQANHIKERLKK---ECLIESEIQIV--KTKGDKILDTPLNKIGGKGLFTKELEELLLKGTIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQLKL 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HAMD5 (Porphobilinogen deaminase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=hemC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 61/132 (46.21%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +IR+ TR SPLAL QAH + L HP+L + ++ + T GD IL L+ GGKGLF KE++ A+++++ DIAVHS+KD+P Y PE L +RED RDAF+ P GS+VGT+SLRR Sbjct: 5 MIRLATRQSPLALWQAHYVKTGLEFFHPDLK----VILLPMVTQGDNILGTALSKTGGKGLFVKELERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQLPEGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_DESVM (Porphobilinogen deaminase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=hemC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 60/129 (46.51%), Postives = 83/129 (64.34%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I TRGS LAL QA ++ + HP ++ ++++++KT GD IL PLA +GGKGLF KEI+EAL++ + D+AVHSMKDVP LPE +L +RE+ D F+ P G+ VGT+SLRR Sbjct: 6 IATRGSKLALWQAEHVKSCIEGQHPGVS----VELLVLKTRGDIILDVPLAKVGGKGLFVKEIEEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALPHGATVGTSSLRR 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BACSU (Porphobilinogen deaminase OS=Bacillus subtilis GN=hemC PE=3 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYSID 746 I++G+R S LA+ Q KL ++P A E I I T GD+I+ L+ +GGKGLF KEI++AL+N +ID+AVHSMKD+P LPE ++ C +RED RDA I G+++GT+SLRRS + I+ Sbjct: 5 IKVGSRRSKLAMTQTKWVIQKLKEINPSFAFE----IKEIVTKGDRIVDVTLSKVGGKGLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKKGAVIGTSSLRRSAQLLIE 138 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |