FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ECO55 (Porphobilinogen deaminase OS=Escherichia coli (strain 55989 / EAEC) GN=hemC PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29 Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QAH ++KLMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ ++ DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAHYVKDKLMASHPGLV----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ECO81 (Porphobilinogen deaminase OS=Escherichia coli O81 (strain ED1a) GN=hemC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QAH ++KLMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ ++ DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAHYVKDKLMASHPGLV----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ECO45 (Porphobilinogen deaminase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hemC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QAH ++KLMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ ++ DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAHYVKDKLMASHPGLV----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ESCF3 (Porphobilinogen deaminase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=hemC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28 Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QAH ++ LMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ ++ DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAHYVKDALMAKHPGLT----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDELPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BRUSU (Porphobilinogen deaminase OS=Brucella suis GN=hemC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28 Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 321 KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 K ++IGTRGS LALAQA+ TR L H E AI+I+ + T GD+I +PL+++GGKGLFT+EI++AL + +IDIAVHS KD+PT LPE L L+RED RDAFI P G+ VG++SLRR Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHG--LPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BRUSI (Porphobilinogen deaminase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=hemC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28 Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 321 KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 K ++IGTRGS LALAQA+ TR L H E AI+I+ + T GD+I +PL+++GGKGLFT+EI++AL + +IDIAVHS KD+PT LPE L L+RED RDAFI P G+ VG++SLRR Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHG--LPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BRUC2 (Porphobilinogen deaminase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=hemC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28 Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 321 KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 K ++IGTRGS LALAQA+ TR L H E AI+I+ + T GD+I +PL+++GGKGLFT+EI++AL + +IDIAVHS KD+PT LPE L L+RED RDAFI P G+ VG++SLRR Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAHG--LPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ALCBS (Porphobilinogen deaminase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=hemC PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28 Identity = 69/132 (52.27%), Postives = 87/132 (65.91%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I+RI TR SPLA+ QA + +L +LH L +++V IKT GDKIL PLA IGGKGLF KE++EA+++ + DIAVHSMKDVP LP LP +RED RDAF+ P G+ VGT+SLRR Sbjct: 5 ILRIATRSSPLAIWQAEYVQQRLESLHEGLR----VELVRIKTQGDKILDTPLAKIGGKGLFVKELEEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSSLPHGACVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SALTY (Porphobilinogen deaminase OS=Salmonella typhimurium GN=hemC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 69/132 (52.27%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QAH ++ LMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ + DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAHYVKDALMATHPGLT----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SALTI (Porphobilinogen deaminase OS=Salmonella typhi GN=hemC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 69/132 (52.27%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QAH ++ LMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ + DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAHYVKDALMATHPGLT----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRR 132 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |