FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PAEMA (Porphobilinogen deaminase OS=Paenibacillus macerans GN=hemC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20 Identity = 61/137 (44.53%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 318 TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 TK I+ +GTR S LAL Q + L L +I I T GD+IL L+ IGGKGLF KEI++A+++ +ID+AVHSMKD+P+ LPE I R+D RDA I P G+ VGT++LRRS Sbjct: 2 TKRTIV-VGTRQSQLALTQTEQVIGDLKELCRAHGLPFEFEIKKIVTKGDRILDVTLSKIGGKGLFVKEIEQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLHLHELPQGARVGTSTLRRS 137
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOTN (Porphobilinogen deaminase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=hemC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20 Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS---LKYSIDI 749 I +G+R S LAL Q + N+L L E + I T GD++L L+ +GGKGLF KEI+ ++ ID+AVHSMKD+P LP ++ +REDVRD + P+G+++GT+SLRRS L Y D+ Sbjct: 4 IVVGSRRSKLALTQTNWVINELKRLGAPFTFE----VKEIVTKGDRVLDVTLSKVGGKGLFVKEIEHEMLTGGIDMAVHSMKDMPAVLPSGLVIGSVPRREDVRDVLVSKGNLSLSDLPSGAVIGTSSLRRSAQLLAYRPDV 141
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_UNCMA (Probable porphobilinogen deaminase OS=Uncultured methanogenic archaeon RC-I GN=hemC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20 Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 +RIGTRGS LALAQA + R L E I +IKT+GD PL + G G F +EID+ L+ +++D+AVHS+KD+PT PE + L+RE D + P G++VGT+S RR+ Sbjct: 1 MRIGTRGSKLALAQAEKVRRLLKEQGVEAT------ITVIKTSGDVQKDSPLYMMKGYGAFVREIDDLLLKNEVDLAVHSLKDIPTVRPENLVTAAVLKRESALDVAVIRNAERLADLPEGAVVGTSSTRRA 126
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BREBN (Porphobilinogen deaminase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=hemC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20 Identity = 57/141 (40.43%), Postives = 81/141 (57.45%), Query Frame = 3 Query: 336 RIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS---LKYSIDI 749 ++GTR S LAL Q + +KL PE ++ I T GD+IL L+ +GGKGLF KEI+++L + + D AVHS+KD+P LP+ ++ +R D RD + P G++VGT+SLRRS L Y DI Sbjct: 5 KVGTRRSKLALTQTNWVVDKLKGFAPE----ADFELHEIVTKGDRILDVTLSKVGGKGLFVKEIEQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGALVGTSSLRRSSQILAYRPDI 141
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROMA (Porphobilinogen deaminase OS=Prochlorococcus marinus GN=hemC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 58/134 (43.28%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 +RI +R S LA+ Q + + +L P + I I + T GDKIL LA IG KGLFTKE++ ++ + DIAVHS+KD+PT LPE +L C +RED DA + P GS+VGT+SLRR Sbjct: 6 VRIASRRSQLAMVQTNWVKEELEKACPSID----ISIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLIGRADIAVHSLKDLPTNLPEGLMLGCITKREDPADALVVNKKYKNYQLNDLPEGSVVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_NEIMB (Porphobilinogen deaminase OS=Neisseria meningitidis serogroup B GN=hemC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I +R S LA+ QA + +L AL+P+ ++I+ + T GD+IL + L+ +GGKGLF KE+++AL + + D+AVHS+KDVP LPE L +R + DAF+ P G++VGT+SLRR Sbjct: 8 IASRESLLAMWQAKHIQGRLKALYPDCE----VEILGMTTRGDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEEMPEGAVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_NEIMA (Porphobilinogen deaminase OS=Neisseria meningitidis serogroup A GN=hemC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I +R S LA+ QA + +L AL+P+ ++I+ + T GD+IL + L+ +GGKGLF KE+++AL + + D+AVHS+KDVP LPE L +R + DAF+ P G++VGT+SLRR Sbjct: 8 IASRESLLAMWQAKHIQGRLKALYPDCE----VEILGMTTRGDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPEGAVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_DESRM (Porphobilinogen deaminase OS=Desulfotomaculum reducens (strain MI-1) GN=hemC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 56/131 (42.75%), Postives = 78/131 (59.54%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I +G+R S LAL Q +L +P++ E I +KT GDK+L LA IG KGLFTKE++ A++ +ID AVHS+KD+PT LPE I+ +R++ DA I P G+ +GT+SLRR Sbjct: 5 ITVGSRDSALALWQTRWVVEQLEKQNPDVTFE----ITTMKTKGDKMLDVALAKIGDKGLFTKELEVAMLQKEIDFAVHSLKDMPTALPEGLIIGAVCKRDNPGDALISKDGRKLDELPKGARIGTSSLRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CLOD6 (Porphobilinogen deaminase OS=Clostridium difficile (strain 630) GN=hemC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19 Identity = 60/135 (44.44%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI-XXXXXXXXXXPAGSIVGTASLRRSLK 734 I +GTRGS LAL Q N+L +PE++ E I IIKT GD I + L IG KGLF KEI++ L++ +IDIAVHSMKD+P+YL +RED RD I P G+++GT S RR + Sbjct: 3 IVVGTRGSNLALIQTEWVINELKKKYPEISFE----IKIIKTKGDLIQNVSLDKIGDKGLFVKEIEQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAVIGTGSKRRKFQ 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_XANOR (Porphobilinogen deaminase OS=Xanthomonas oryzae pv. oryzae GN=hemC PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19 Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RI TR SPLAL Q+ L HP L + +V + T GD++L + LA IG KGLF KE++ A++ D AVHS KDVP L + +LP L+R D DA + P G+ VGT+SLRR Sbjct: 4 LRIATRKSPLALWQSEHVAAALRQHHPGLE----VVLVPMSTRGDEVLDRSLAAIGDKGLFLKELELAMLRGDADCAVHSFKDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGARVGTSSLRR 130 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |