FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CAMJE (Porphobilinogen deaminase OS=Campylobacter jejuni GN=hemC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19 Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHP-ELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 I TR S LAL Q+ L H E+ EG KT GD +L PLA IGGKGLFTKE++E+++ + +AVHS+KDVP++ P+ +L +RE DA + P G+ +GT SLRR ++ Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQIEVLLEG------FKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQ 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_THENV (Probable porphobilinogen deaminase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=hemC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 IR+ TRGS L+L Q E ++ A+ P++ E IV++KTTGD I +PL IG KG+F KE++ A++ + D+AVHS+KD+P+ L L +R DA + P G++VGT+S+RR+ Sbjct: 3 IRVATRGSKLSLIQTEELLAQIKAVEPDIRFE----IVVVKTTGDLIQDKPLFQIGVKGVFEKEVNLAVLRGEADMAVHSLKDLPSDLTPGLALAGYSRRAPPNDALVSPRGYTLETLPRGAVVGTSSVRRA 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROM9 (Porphobilinogen deaminase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 59/134 (44.03%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 ++I +R S LA+ Q +++L P L + I + T GDKIL LA IG KGLFTKE++ ++ Q DIAVHS+KD+PT LP L C +RED DA + PAGSIVGT+SLRR Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLEKNIPNLE----VSIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYKLETLPAGSIVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_MOOTA (Porphobilinogen deaminase OS=Moorella thermoacetica (strain ATCC 39073) GN=hemC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 58/131 (44.27%), Postives = 76/131 (58.02%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I++G+R S LA QA L P L+ ++V +KT GDKIL LA IG KGLFTKE++ AL++ ID+AVHSMKD+PT LPE ++ RED D + P + VGT+SLRR Sbjct: 4 IKVGSRESELARWQARWVIQALEKAWPGLS----CRLVTLKTKGDKILDVALARIGDKGLFTKELELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIKARVGTSSLRR 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_DEBHA (Porphobilinogen deaminase OS=Debaryomyces hansenii GN=HEM3 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 55/140 (39.29%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINS-----QIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRRS 728 ++IG R S LA+ Q+ + ++ PEL+ ++ + T GDK+ S+PL GGK L+TKE++ L+ ++D+ VHS+KD+PT LPE+ L C L RED RDA + P GS+VGT+S+RRS Sbjct: 19 VQIGGRKSKLAVVQSEIVKECIVEKFPELS----CSVLALSTLGDKVQSKPLYSFGGKALWTKELEILLLEQVEEYPRLDLIVHSLKDIPTNLPEEFELGCILNREDARDALVMKSGSSYKSLADLPDGSLVGTSSVRRS 154
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CAMJD (Porphobilinogen deaminase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=hemC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHP-ELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 I TR S LAL Q+ L H E+ EG KT GD +L PLA IGGKGLFTKE++E+++ + +AVHS+KDVP++ P+ +L +RE DA + P G+ +GT SLRR ++ Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQIEVLLEG------FKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSTDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQ 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BACCN (Porphobilinogen deaminase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=hemC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 I +G+R S LAL Q + ++L AL L E ++ ++ K GD IL L+ +GGKGLF KEI+ AL+ +ID+AVHSMKD+P LP + C +R D RDAFI G+ +GT+SLRRS Sbjct: 4 IIVGSRKSKLALTQTNWFIDQLQALG--LPYEFEVKEIVTK--GDVILDVTLSKVGGKGLFVKEIEHALLTKEIDMAVHSMKDMPAVLPAGLTIGCIPKRVDPRDAFISKNGKSFKELAKGATLGTSSLRRS 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_NITMS (Probable porphobilinogen deaminase OS=Nitrosopumilus maritimus (strain SCM1) GN=hemC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYS 740 +G RGS L++AQ + +L HP+ E I I T GD S+PL I KG+F KEID A+ ++D AVHS+KDVP+ L + +L C +RE V D FI GS++GT+SLRR+++ S Sbjct: 5 VGARGSQLSVAQTNLVIAELKKAHPDTEYE----IKTITTKGDTD-SRPLFTIDQKGIFEKEIDRAVAQKEVDFAVHSLKDVPSELDDNLVLACIPKRETVNDVFISPDGSTLDSIKPGSVIGTSSLRRAVQVS 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_MYCGI (Porphobilinogen deaminase OS=Mycobacterium gilvum (strain PYR-GCK) GN=hemC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 55/132 (41.67%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +IRIGTRGS LA QA R+ L+A + ++VII T GD+ +P+ADIG G+FT + EA+ ++ +D AVHS KD+PT + + ++ RED RDA + PAGS++GT+S RR Sbjct: 1 MIRIGTRGSLLATTQAGTIRDALIAAGHDA------ELVIISTEGDRRADEPIADIG-VGVFTAALREAIADNVVDAAVHSYKDLPTAVDPRFMIAATPVREDARDALVARDGMVLGELPAGSVIGTSSPRR 125
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HUMAN (Porphobilinogen deaminase OS=Homo sapiens GN=HMBS PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 321 KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRRSLKYSIDIHH 755 K+ +IR+GTR S LA Q L A +P L E I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP + +RE+ DA + P S+VGT+SLRR+ + H Sbjct: 17 KMRVIRVGTRKSQLARIQTDSVVATLKASYPGLQFE----IIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPH 160 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |