FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CAMJ8 (Porphobilinogen deaminase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=hemC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 54/133 (40.60%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHP-ELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 I TR S LAL Q+ L H E+ EG KT GD +L PLA IGGKGLFTKE++E+++ + +AVHS+KDVP++ P +L +RE DA + P G+ +GT SLRR ++ Sbjct: 5 IATRKSQLALWQSEHVAQILKNTHQIEVLLEG------FKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQ 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SYNY3 (Porphobilinogen deaminase OS=Synechocystis sp. (strain PCC 6803) GN=hemC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 312 VETKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 V T +RIG+R S LAL Q + + +L P+ + ++T GDKIL LA IG KGLFT+E+++ ++ + D+AVHS+KD+PT LP +L C +R + DA + P G+++GT+SLRR Sbjct: 3 VSTSAPTVRIGSRKSQLALVQTYWVQEELQKHFPDRQ----FDVETMETQGDKILDVALAKIGDKGLFTQELEDGMLGKRTDLAVHSLKDLPTNLPAGLMLGCVTKRVNPADALVLNAKHQGKDLASLPEGAVIGTSSLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_NATTJ (Porphobilinogen deaminase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hemC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19 Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL Q + +L +P++ I+I I+T GD++L+ L+ +GGKGLF KEI AL+ +ID+AVHSMKD+PT E + +R D DA I P + +GT+SLRR Sbjct: 3 LRIGTRRSQLALDQTNWVVEQLKTHYPDIE----IEIKKIETKGDQLLNVSLSKVGGKGLFLKEIQNALLQGEIDLAVHSMKDIPTETTEDLEICAITKRVDPLDALISNNDITIDELPENAKIGTSSLRR 129
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_LISIN (Porphobilinogen deaminase OS=Listeria innocua GN=hemC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19 Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 I +G+R S LAL Q++ KL +PE+ E I I T GD+IL L+ +GGKGLF E+++AL + ID AVHSMKDVP+ L + ++ +RE D F+ P G+++GT+SLRR+ Sbjct: 5 IIVGSRRSKLALTQSNWVIKKLKENYPEIDFE----IKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHSMKDVPSSLKDGLVIGAIPKRESPLDCFVFNEVSTLDDLPKGAVIGTSSLRRA 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_EXIS2 (Porphobilinogen deaminase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=hemC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19 Identity = 58/134 (43.28%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGA---IQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I +G+R S LA+ Q +L Q GA +I I T GD+IL L+ +GGKGLF KEI++ +I+ ID AVHSMKD+P+ LP I+ R D RDA I P G+IVGT+SLRR Sbjct: 4 IIVGSRSSKLAMTQTKWVIE-------QLKQAGAPYEFEIKNIITKGDRILDVTLSKVGGKGLFVKEIEQQMIDEDIDFAVHSMKDLPSELPTGLIIGATPSRVDARDALITTTGGGLDSLPEGAIVGTSSLRR 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_METBU (Probable porphobilinogen deaminase OS=Methanococcoides burtonii (strain DSM 6242) GN=hemC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19 Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS---LKYSIDIH 752 +GTRGS LA+AQA L EL + +IKT+GD +PL ++ G G+F +E+D+ +I ++DIAVHSMKD+PT P + + L+R+ D + P G+I+GT S+RR L+Y D++ Sbjct: 3 LGTRGSALAIAQADLVTKMLEEKGHELTRN------VIKTSGDVFTDRPLHEVAGVGVFVRELDDRMIEGEVDIAVHSMKDLPTVRPPELAIAAVLKRDSPYDVLLTADGSTLDELPDGAIIGTTSMRRRAQLLRYRPDLN 137
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROM5 (Porphobilinogen deaminase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18 Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 ++I +R S LA+ Q + +L P L + I + T GDKIL LA IG KGLFTKE++ ++ + DIAVHS+KD+PT LP+ L C +RED DA + PAGSIVGT+SLRR Sbjct: 6 LKIASRRSKLAMVQTLWVKEQLEKNIPNLE----VSIESMATQGDKILDVALAKIGDKGLFTKELEAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQLESLPAGSIVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROMP (Porphobilinogen deaminase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18 Identity = 57/134 (42.54%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 ++I +R S LA+ Q + +L P+L + I + T GDKIL LA IG KGLFTKE++ ++ DIAVHS+KD+PT LP+ L C +RED DA + P GSIVGT+SLRR Sbjct: 6 LKIASRRSKLAMVQTLWVKEQLEKNIPDLE----VSIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQLESLPPGSIVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_RUBXD (Porphobilinogen deaminase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=hemC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18 Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +GTRGSPLALAQA L A A+++ I+TT D+ PL+ I + +FT+++DEAL+ ++D+AVHSMKDVPT +PE +L R D DA + P G+ V T+SLRR Sbjct: 7 LGTRGSPLALAQAEACAAGLRAAG------FAVELRRIRTTSDRRPDDPLSVIDQRDVFTRQLDEALLAGEVDLAVHSMKDVPTEVPEGIVLAAVAGRADPSDALVSEGGWGVDGLPEGARVATSSLRR 129
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HALSA (Probable porphobilinogen deaminase OS=Halobacterium salinarium GN=hemC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18 Identity = 50/131 (38.17%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IR+ TRGS LAL QA E + L + +++V ++T GD++ ++D+G G F + +D+ ++ +D AVHSMKDVPT +PE ++ RE+ D + PAGS+VGTASLRR Sbjct: 6 IRLATRGSDLALRQAGEVVDTLEDRRHD------VELVEVETEGDRVTDALISDLGKTGAFVRALDQEVMEGTVDAAVHSMKDVPTEVPEDLVVAAVPHRENPADVLVTPDGTDLEDLPAGSVVGTASLRR 130 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |