FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CLOJO (Porphobilinogen deaminase OS=Clostridium josui GN=hemC PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP--CNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 IRIG+R S LA+ Q+ + + P++ ++++ +KTTGDKIL + L I GKGLF KE+D AL N+++DI VHS KD+P L E LP +RED RDAFI G +G++SLRR L+ Sbjct: 4 IRIGSRDSKLAIIQSELIMSAIRKYDPDIE----LELITMKTTGDKILDKTLDKIEGKGLFVKELDNALYNNEVDITVHSYKDMP--LEENPELPVVALSKREDPRDAFILPQNGEN-----GEPIGSSSLRRQLQ 128
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_MOUSE (Porphobilinogen deaminase OS=Mus musculus GN=Hmbs PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 3 Query: 318 TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 +K+ +IR+GTR S LA Q L AL+P + E I+ + TTGDKI+ L+ IG K LFTKE++ AL +++D+ VHS+KDVPT LP + +R++ DA + P S VGT+SLRR Sbjct: 16 SKMRVIRVGTRKSQLARIQTETVVAMLKALYPGIQFE----IIAMSTTGDKIVDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRQNPCDAVVFHPKFIGKTLETLPEKSAVGTSSLRR 150
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PYRCJ (Probable porphobilinogen deaminase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=hemC PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 48/132 (36.36%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 IR+ TRGS L+L Q E +++ A+ P++ E +V++KTTGD + +PL IG KG+F KE++ A++ + D+AVHS+KD+P+ L ++ +R D P G++VGT+S+RR+ Sbjct: 3 IRVATRGSKLSLLQTQELLDQVKAVEPKVEFE----LVVVKTTGDVVQDRPLYQIGVKGIFEKEVNLAVLRGEADVAVHSLKDLPSELTPGLVIAGFSRRAPPYDVVASREGYSLYTLPKGAVVGTSSVRRA 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CLOCE (Porphobilinogen deaminase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=hemC PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSI------VGTASLRRSLK 734 IRIG+R S LA+ Q+ + P++ ++++ +KTTGDKIL + L IGGKGLF KE+D AL N+++DI VHS KD+P K + +RED RDAF+ P G I +G++S RR L+ Sbjct: 4 IRIGSRDSKLAIIQSEMVMAAIREFDPDIE----LELITMKTTGDKILDKTLDKIGGKGLFVKELDYALYNNEVDITVHSYKDMPLEDNPKLPVVALSKREDPRDAFV---------LPQGEIAENNEPIGSSSQRRQLQ 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_XYLFA (Porphobilinogen deaminase OS=Xylella fastidiosa GN=hemC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR S LA+ Q+ +L L P+L + +V + T GD+IL + LA IGGKGLF KE++ A++ D AVHS+KDVP L +L L R+D DA I P G+ V T+SLRR Sbjct: 3 LLRIATRKSLLAMWQSEYVAARLRMLRPDLD----VVLVPMSTRGDEILDRSLAAIGGKGLFLKELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGARVATSSLRR 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROMS (Porphobilinogen deaminase OS=Prochlorococcus marinus (strain AS9601) GN=hemC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 57/134 (42.54%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 ++I +R S LA+ Q +++L P L + I + T GDKIL LA IG KGLFTKE++ ++ DIAVHS+KD+PT LP L C +RED DA + P GSIVGT+SLRR Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLEKNIPNLE----VSIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLENLPEGSIVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROM0 (Porphobilinogen deaminase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 57/134 (42.54%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 ++I +R S LA+ Q +++L P L + I + T GDKIL LA IG KGLFTKE++ ++ DIAVHS+KD+PT LP L C +RED DA + P GSIVGT+SLRR Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLERNIPNLE----VSIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLETLPEGSIVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_XYLFM (Porphobilinogen deaminase OS=Xylella fastidiosa (strain M12) GN=hemC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR S LA+ Q+ +L L P+L + +V + T GD+IL + LA IGGKGLF KE++ A++ D AVHS+KDVP L +L L R+D DA I P G+ V T+SLRR Sbjct: 3 LLRIATRKSLLAMRQSEYVAARLRMLCPDLD----VVLVPMSTRGDEILDRSLAAIGGKGLFLKELELAMLRGDADCAVHSLKDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGARVATSSLRR 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROM2 (Porphobilinogen deaminase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 57/134 (42.54%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 ++I +R S LA+ Q +++L P L + I + T GDKIL LA IG KGLFTKE++ ++ DIAVHS+KD+PT LP L C +RED DA + P GSIVGT+SLRR Sbjct: 6 LKIASRRSKLAMVQTLWVKDQLERNIPNLD----VSIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYKLETLPEGSIVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CYTH3 (Porphobilinogen deaminase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=hemC PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17 Identity = 60/133 (45.11%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMA--LHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTRGS LAL QA L L P QIVII TTGDKIL Q L+ IG KGLFT+E++E L IDIAVHS KD+ T+L + +RE V D + I+GT+S RR Sbjct: 5 VRIGTRGSKLALWQAEHVAACLQTKGLEP--------QIVIIDTTGDKILDQSLSKIGSKGLFTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKNNPDLIIGTSSTRR 129 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |