FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YARLI (Porphobilinogen deaminase OS=Yarrowia lipolytica GN=HEM3 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.967e-17 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 315 ETKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINS-----QIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRRS 728 ++++ + +G R S LAL Q L +HP+ + ++ + T GD++ S+PL GK L+TKE++ L+ Q DI VHS+KD+PT LP+ L L RED RDA + PAGS+VGT+S+RRS Sbjct: 13 QSELPKVFVGGRKSKLALVQTQHVAAMLKKVHPDYS----FPVLGLTTLGDQVQSKPLYSFDGKALWTKELETLLLEKVPGFDQQDIIVHSLKDMPTVLPDGCELGAILTREDPRDALVMAAGSPYKTLADLPAGSVVGTSSIRRS 154
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CLOK1 (Porphobilinogen deaminase OS=Clostridium kluyveri (strain NBRC 12016) GN=hemC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.967e-17 Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 336 RIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 RI TR S LAL Q + L+AL ++ E V+I+T GD+ L L IGGKG+F K+I++ALI + AVHSMKD+P L + + REDVRD FI P G+++GT+S+RR+++ Sbjct: 4 RIATRKSKLALVQTDYVID-LLALKFKMQCEK----VLIRTEGDRKLDVSLDKIGGKGVFVKDIEKALIEKRAQAAVHSMKDMPNELLDLFEIIAMPVREDVRDVFISPEGIKFLDLPKGAVIGTSSIRRAVQ 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_FUSNN (Porphobilinogen deaminase OS=Fusobacterium nucleatum subsp. nucleatum GN=hemC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPL--ADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSL 731 I IG+RGS LALAQA+ +++L +P L+ E I I T+GDK L +DI K FTKEI++ L++ +IDIAVHSMKD+P + I RED RD + P G+ VGT+SLRR++ Sbjct: 5 IIIGSRGSILALAQANLVKDRLQGNYPNLSFE----IKEIVTSGDKDLKSNWENSDISLKSFFTKEIEQELLDGEIDIAVHSMKDMPAVSAKSLICGAIPDREDPRDVLV-SKNGLLVTLPQGAKVGTSSLRRAM 134
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ERWCH (Porphobilinogen deaminase (Fragment) OS=Erwinia chrysanthemi GN=hemC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVP 587 I+RI TR SPLAL QAH + +L A HP L +++V + T G +L PLA +GGKGLF KE++ AL+ ++ DIAVHSMKDVP Sbjct: 5 ILRIATRQSPLALWQAHFVQQRLEACHPGLR----VELVPMVTRGXLLLDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVP 86
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_METMA (Probable porphobilinogen deaminase OS=Methanosarcina mazei GN=hemC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADI-GGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 IGTRGS LALAQ L E + I IIKT+GD+ +PL + GG G F +E+D+ ++ +IDIAVHSMKD+PT P+ L+R+ D + P SI+GT+SLRR+ Sbjct: 3 IGTRGSQLALAQTENVARLLKEKGVETS------IKIIKTSGDRFTDRPLHAVSGGVGAFVRELDDVMLAGEIDIAVHSMKDMPTIRPKAIPTVAVLKRDTPFDILLTYDGTPLDELPEQSIIGTSSLRRT 127
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_METAC (Probable porphobilinogen deaminase OS=Methanosarcina acetivorans GN=hemC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADI-GGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 IGTRGS LALAQ L E + I IIKT+GD+ +PL + GG G F +E+D+ ++ +IDIAVHSMKD+PT PE L+R+ D + P +I+GT+SLRR+ Sbjct: 3 IGTRGSQLALAQTENVARLLKERGVETS------IKIIKTSGDRFTDRPLHAVSGGVGAFVRELDDVMLAGEIDIAVHSMKDMPTIRPEGLPTVAVLKRDTPFDILLTYDGTTLDELPEQAIIGTSSLRRT 127
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CLOAB (Porphobilinogen deaminase OS=Clostridium acetobutylicum GN=hemC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 + I TR S LA Q N L + +++ ++++T GDKIL + LADIGGKGLF K+I+ L+ + D AVHSMKDVP +P+ + R DVRD F+ G+++GT+S RR+ Sbjct: 3 LTIATRKSKLAQVQTELIINVLKDKYGISSEK-----LLMETLGDKILDKSLADIGGKGLFIKDIERILLEDKADAAVHSMKDVPFEVPDMFEIAAVTLRVDVRDVFVSRDGTHFKDLKNGAVIGTSSNRRA 129
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HYPBU (Probable porphobilinogen deaminase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=hemC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI--XXXXXXXXXXPAGSIVGTASLRR 725 +R+ TRGS L++AQ + + P L E +VI+KT GD +P IGGKGLF KE++ A++ + DIAVHS+KDVP+ + +L R+ D + P+G+IVGT+S RR Sbjct: 3 LRVATRGSKLSIAQTMIALEAIKRVEPSLEYE----LVIVKTRGDIHQDKPFTAIGGKGLFEKEVNLAVLEGRADIAVHSLKDVPSAISPGLVLAMTPPRDPPYDVLVVRGGKEKTIWDLPSGAIVGTSSARR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ACIC1 (Porphobilinogen deaminase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=hemC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.450e-16 Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 324 VAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 ++++R+GTR S LA AQ E L A ++IV I++TGD+ PL + G G+F E+ AL+ ++D+ VHSMKD+PT + + +R D RDA + P G+IVGT S RR+ Sbjct: 7 LSVLRLGTRRSTLARAQTEEIAGALRAAGCR------VEIVGIQSTGDRHADVPLHEFAGSGVFVAELRAALLRGEVDVVVHSMKDLPTAEIPELAIAAIPRRADPRDALVTGAGCRLAELPTGAIVGTGSPRRA 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CLOP1 (Porphobilinogen deaminase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=hemC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16 Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 I TR S LA Q K+M L E + +++++ T GD+ L L IGGKGLF KEI+ AL+N + AVHSMKDVP LP + L +RED+RDAF+ G+ +GT+S+RR+ Sbjct: 5 IATRKSKLAQVQTE----KVMELLKEKENVDSKKLLVM-TEGDRRLDVSLNKIGGKGLFVKEIELALLNKEAHGAVHSMKDVPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARIGTSSIRRA 129 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |