FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_BRUO2 (Porphobilinogen deaminase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=hemC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++IGTRGS LALAQA+ TR L H E AI+I+ + T GD+I +PL+++GGKGLFT+EI++AL + +IDIAVHS KD+PT LPE L L+RED RDAFI P G+ VG++SLRR Sbjct: 1 MKIGTRGSKLALAQAYLTRRLLQEAHG--LPEDAIEILPMSTAGDRIQDRPLSEVGGKGLFTEEIEQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVGSSSLRR 129
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PELCD (Porphobilinogen deaminase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hemC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 69/131 (52.67%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA + +L LHP L+ + +V I T GDKIL PLA +GGKGLF KEI+EAL + ID+AVHSMKDVP+ LP ILPC RED RDA + P G+ +GT++LRR Sbjct: 6 LRIGTRASRLALWQAEWVQQQLETLHPGLS----VVLVPITTKGDKILDVPLAKVGGKGLFVKEIEEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQLPQGARIGTSALRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SALAR (Porphobilinogen deaminase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemC PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28 Identity = 68/132 (51.52%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +++I TR SPLAL QAH ++ LMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ + DIAVHSMKDVP P+ L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLKIATRQSPLALWQAHYVKDALMATHPGLT----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDDLPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPS (Porphobilinogen deaminase OS=Yersinia pseudotuberculosis GN=hemC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPB (Porphobilinogen deaminase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=hemC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPY (Porphobilinogen deaminase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=hemC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYTHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPP (Porphobilinogen deaminase OS=Yersinia pestis (strain Pestoides F) GN=hemC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPN (Porphobilinogen deaminase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=hemC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPG (Porphobilinogen deaminase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=hemC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPE (Porphobilinogen deaminase OS=Yersinia pestis GN=hemC PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |