FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_THEVO (Probable porphobilinogen deaminase OS=Thermoplasma volcanium GN=hemC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR--SLKYS 740 I+IGTR S LA+AQA+ + L A+ + +IV ++ GD P+ IG G+F ++++ ++ +ID+AVHS KD+P+ + + + L+R DA + P + VGT+S+RR LKY+ Sbjct: 3 IKIGTRPSNLAVAQANMVASSLEAIGIDT------EIVKHRSAGDIDTKNPIYSIGKTGVFVQDLNNMILRGEIDVAVHSAKDIPSEIENRLTIAATLKRGSFNDALV--SKYDLRSLPISAKVGTSSIRRIFQLKYA 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SCHPO (Porphobilinogen deaminase OS=Schizosaccharomyces pombe GN=hem3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12 Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIG---GKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI---XXXXXXXXXXPAGSIVGTASLRR 725 IGTR S LA+ Q+ R +L +P L I+ T GD+ILS+ L + K L+T+E++ L+ +Q I VHS+KD+P+ +P+ ++ C +R DA + P GS+VGT+S+RR Sbjct: 9 IGTRKSKLAVIQSEIIREELEKHYPHLE----FPIISRDTIGDEILSKALFEFKRQLAKSLWTRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHYKTVADLPPGSVVGTSSIRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_COREF (Porphobilinogen deaminase OS=Corynebacterium efficiens GN=hemC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTRGS LA QA R++L + ++ I+ T GD +S P+ IG G+FT+ + +AL+ +ID+AVHS KD+PT P+ R D RDA I P G+ VGT++ RR Sbjct: 3 LRIGTRGSKLATTQAGHMRDRLKHFGRDA------ELTIVTTPGDVNMS-PVERIG-VGVFTQALRDALVADEIDVAVHSFKDLPT-APDPRFHLVVPTRADARDALIARDGLTLEELPEGAKVGTSAPRR 124
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_THEFY (Porphobilinogen deaminase OS=Thermobifida fusca (strain YX) GN=hemC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12 Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 336 RIGTRGSPLALAQAHETRNKLMALHPELAQEGA-IQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 R+GTR S +A Q+ L A + G +++V+I + GD I L +GG G+F + +AL+ +++ AVHS+KD+PT E +L +R+D RDA P G+ VGT S RR Sbjct: 7 RLGTRRSTMATNQSRRVAEILTA------RTGVPVELVLITSFGD-ITRAHLTQLGGTGVFVSALRDALLAGEVEFAVHSLKDLPTAPTEGIVLAAVTERDDPRDALCARDGLKFADLPPGATVGTGSPRR 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_THEAC (Probable porphobilinogen deaminase OS=Thermoplasma acidophilum GN=hemC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRIGTR S LA+ QA + + E ++IV ++ GD L PL IG G+F + ++ +++ ID AVHS KD+P + + + + R DA + P GS++GT+SLRR Sbjct: 4 IRIGTRPSRLAVRQAEIVASAIRHAGYE------VEIVKYRSEGDSDLKSPLYSIGKTGVFVERLNSLILSGDIDAAVHSAKDIPYEIDRRLRISAVMPRGRFEDALV--SENPLSKLPPGSVIGTSSLRR 126
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_METS5 (Probable porphobilinogen deaminase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=hemC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11 Identity = 50/132 (37.88%), Postives = 69/132 (52.27%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 IRI RGS L+L Q L A E + + IKT D ++PL +IG KG+F KE++EA++ + DIAVHSMKD+ + LP L +RE+ D + P S +GT SLRR+ Sbjct: 3 IRIAARGSKLSLKQVEIVTTYLQAKGYET------EFIEIKTKADLFGNKPLHEIG-KGVFEKEVNEAVLQGRADIAVHSMKDMSSELPPGLELLATPKRENPVDVLV--SELNLEELPEKSRIGTGSLRRA 125
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM31_STRAW (Porphobilinogen deaminase 1 OS=Streptomyces avermitilis GN=hemC1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11 Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTA 713 +R+GTR S LA+AQ+ + + + + +++V I T GD + LA IGG G+F + +AL+ ++D AVHS+KD+PT P++ L RED RD + A S GTA Sbjct: 6 LRLGTRRSKLAMAQSGQVADAVRQVTGR-----PVELVEITTYGDTS-REHLAQIGGTGVFVTALRDALLRGEVDFAVHSLKDLPTAQPDELALAAVPVREDPRDVLVARDGLTFEELGAPSPKGTA 126
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CALS8 (Porphobilinogen deaminase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=hemC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11 Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSL 731 +RIG R S L+ Q K+ L E + V IKT GD ++ L D G+F KEI+ AL++ +ID+AVHS+KD+P + + ++RED RD + + +GT+SLRR + Sbjct: 4 LRIGARDSKLSRIQVDIVARKIKQT---LGIE--CEFVPIKTKGDIDKTKSLKDFKSPGVFVKEIELALLSREIDLAVHSLKDLPCEMDSNFEIVAVVEREDPRDVLVSKDGVGFYQLKPNAKIGTSSLRREV 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SULTO (Probable porphobilinogen deaminase OS=Sulfolobus tokodaii GN=hemC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11 Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI RGS L+ Q N L L E + + IKT D ++PL+ +G KG+F KE+++A+++++ D+AVHSMKD+ T + E + L R+ D I SI+GT+S+RR Sbjct: 3 IRIAARGSKLSRIQVMMVENYLHKLGIET------EFIEIKTKADLFQNEPLSKLG-KGVFEKEVNQAVLDNKADVAVHSMKDILTEISENLEIYAVLPRDPPFDILI--SRKNLFNLEPNSIIGTSSIRR 124
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CORDI (Porphobilinogen deaminase OS=Corynebacterium diphtheriae GN=hemC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11 Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEK--TILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++IGTRGS LA Q+ R+ L EL VI+ T GD ++ P+ IG G+FT+ + E L DIAVHS KD+PT L + ++P +R D RD I PAG+++GT + RR Sbjct: 3 LKIGTRGSLLATTQSGHVRDDLRPYEAEL--------VIVTTHGDVNMA-PVERIG-VGVFTQALREELHTGGCDIAVHSFKDLPTELDPRFHLVVP---KRADFRDCLIARDGLSLADLPAGALIGTGAPRR 122 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |