FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERPA (Porphobilinogen deaminase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=hemC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERP3 (Porphobilinogen deaminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=hemC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L I++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----IELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICEREDPRDAFVSSHYAHLDDLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_MANSM (Porphobilinogen deaminase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27 Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR-----SLKYSIDI 749 ++I TR SPLAL QA+ +++L AL+P+L +++V + T GD IL PLA IGGKGLF KE++ AL+N + DIAVHSMKDVP P+ L +RED RDAF+ P G+IVGT+SLRR SL+ +DI Sbjct: 7 LKIATRQSPLALWQANYVKDRLTALYPDLQ----VELVTMVTKGDVILDTPLAKIGGKGLFVKELEHALLNHEADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAELPQGAIVGTSSLRRQCQLKSLRPDLDI 146
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ACIAD (Porphobilinogen deaminase OS=Acinetobacter sp. (strain ADP1) GN=hemC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27 Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++I TR SPLAL QA R++L AL+PEL +++V T GDKIL PLA IGGKGLF KE++ AL++ + D+AVHSMKDVP +LPE L +RED DAF+ P G+ VGT+SLRR Sbjct: 9 LKIATRQSPLALWQAEHIRDRLQALYPELK----VELVKFVTQGDKILDTPLAKIGGKGLFVKELEAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLPLGARVGTSSLRR 135
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERE8 (Porphobilinogen deaminase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=hemC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.515e-27 Identity = 70/132 (53.03%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ + DIAVHSMKDVP PE L +R+D RDAF+ PAGSIVGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----VELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDELPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOSL (Porphobilinogen deaminase OS=Geobacter sulfurreducens GN=hemC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ +++L +P + +++V IKT GDKIL PLA +GGKGLF KEI+EA++ +IDIAVHSMKDVPT PE L C +RED RDAFI P G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPGME----VELVKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFI-SNGVTFANLPQGAKIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ENTS8 (Porphobilinogen deaminase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=hemC PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 67/132 (50.76%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QA + +L A HP L +++V + T GD IL PLA +GGKGLF KE++ A+++ + DIAVHSMKDVP PE L +RED RDAF+ PAGSIVGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAQYVKQRLEACHPGLT----VELVPMVTRGDVILDTPLAKVGGKGLFVKELELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDEMPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SERP5 (Porphobilinogen deaminase OS=Serratia proteamaculans (strain 568) GN=hemC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH + +LMA HP L +++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP P L +R+D RDAF+ P GS+VGT+SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQQRLMANHPGLQ----VELVPMVTKGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQLPQGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_WOLSU (Porphobilinogen deaminase OS=Wolinella succinogenes GN=hemC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 I IGTRGS LAL QA + +L H L+ +++ I+KT GDKIL PLA +GGKGLFTKE++E ++ +ID+AVHS+KDVP L E L +REDVRD F+ P G+ VGT SLRRS++ Sbjct: 4 IIIGTRGSVLALWQAEYVKAELERAHEGLS----VELKIVKTKGDKILDVPLAKVGGKGLFTKELEEMMLQGEIDLAVHSLKDVPVELIEGLTLSAITEREDVRDCFLSDKYASLETLPLGAKVGTTSLRRSMQ 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_VIBSL (Porphobilinogen deaminase OS=Vibrio splendidus (strain LGP32) GN=hemC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 70/147 (47.62%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 318 TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS---LKYSIDI 749 T A IRI TR SPLAL QA+ R+ L A HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR L+Y D+ Sbjct: 2 TNSAPIRIATRKSPLALWQAYFVRDALQAAHPGLE----VELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRRQCQLLEYRPDL 144 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |