FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEPF (Porphobilinogen deaminase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hemC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 68/131 (51.91%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L A HP L + +V + + GDK+L PL+ IGGKGLF KE++ AL+ ++ DIAVHSMKDVP PE L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEAAHPGLL----VTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOMG (Porphobilinogen deaminase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ + +L +P +A +++V IKT GDKIL PLA +GGKGLF KEI+EA++ +IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWVKGELEKRYPGMA----VELVKIKTMGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVI-SRGVKFADLPQGARIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_VIBPA (Porphobilinogen deaminase OS=Vibrio parahaemolyticus GN=hemC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 318 TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 T+ IRI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR Sbjct: 2 TQSTPIRIATRKSPLALWQAHFVKDALQAAHPGLE----VELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINELPQGAVVGTCSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEPW (Porphobilinogen deaminase OS=Pseudomonas putida (strain W619) GN=hemC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 68/131 (51.91%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLL----VTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEPG (Porphobilinogen deaminase OS=Pseudomonas putida (strain GB-1) GN=hemC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 68/131 (51.91%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLL----VTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEE4 (Porphobilinogen deaminase OS=Pseudomonas entomophila (strain L48) GN=hemC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26 Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PAGS+VGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLQ----VSLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEALPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_VIBHB (Porphobilinogen deaminase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26 Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 318 TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 T+ IRI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR Sbjct: 2 TQSTPIRIATRKSPLALWQAHFVKDALQAAHPGLE----VELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROMI (Porphobilinogen deaminase OS=Proteus mirabilis GN=hemC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26 Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR SPLA+ QA + +L HP L +++V + T GD IL PLA +GGKGLF KE++ AL++S+ DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 6 IRIATRQSPLAMWQALYVKEQLQIAHPSLV----VELVPMVTKGDIILDTPLAKVGGKGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PROMH (Porphobilinogen deaminase OS=Proteus mirabilis (strain HI4320) GN=hemC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26 Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR SPLA+ QA + +L HP L +++V + T GD IL PLA +GGKGLF KE++ AL++S+ DIAVHSMKDVP PE L +RED RDAF+ PAGS+VGT+SLRR Sbjct: 6 IRIATRQSPLAMWQALYVKEQLQIAHPSLV----VELVPMVTKGDIILDTPLAKVGGKGLFVKELELALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQLPAGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_VIBFM (Porphobilinogen deaminase OS=Vibrio fischeri (strain MJ11) GN=hemC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR Sbjct: 7 VRIATRKSPLALWQAHFVKDALQAAHPGLE----VELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRR 133 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |