FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_VIBF1 (Porphobilinogen deaminase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP PE L +RED RDAF+ P G++VGT SLRR Sbjct: 7 VRIATRKSPLALWQAHFVKDALQAAHPGLE----VELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SYNFM (Porphobilinogen deaminase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=hemC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRS 728 +IRIGTRGS LAL Q+ + + AL P L +++ +++TTGDKIL PLA +GGKGLF KEI++AL+ +D+AVHSMKDVP LPE + +RED RD + P G VGT+SLRR+ Sbjct: 5 VIRIGTRGSMLALKQSGNVKAAMEALWPGLR----VELQVVRTTGDKILDVPLAKVGGKGLFVKEIEDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIADLPMGGRVGTSSLRRA 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PHOLL (Porphobilinogen deaminase OS=Photorhabdus luminescens subsp. laumondii GN=hemC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26 Identity = 68/131 (51.91%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR SPLA+ QA + KL HP+L +Q+V + T GD IL PLA IGGKGLF KE++ AL+ + DIAVHSMKDVP PE L +R+D RDAF+ P GSIVGT+SLRR Sbjct: 6 IRIATRQSPLAMWQALYVQQKLQQCHPDLE----VQLVPMVTQGDVILDTPLAKIGGKGLFVKELELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDELPTGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_YERIN (Porphobilinogen deaminase (Fragment) OS=Yersinia intermedia GN=hemC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLAL QAH ++ L A HP L +++V + T GD IL PLA +GGKGLF KE++ AL++ + DIAVHSMKDVP PE L + +D RDAF+ PAGSIVG +SLRR Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANHPGLQ----VELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPDDPRDAFVSPHFAHIDDLPAGSIVGNSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_VIBCH (Porphobilinogen deaminase OS=Vibrio cholerae GN=hemC PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR SPLAL QA+ ++ LMA HP L +++V + T GD IL PLA +GGKGLF KE++ A++ + D+AVHSMKDVP P+ L +RED RDAF+ P+G+IVGT SLRR Sbjct: 6 IRIATRQSPLALWQANYVKDALMAAHPGLQ----VELVTMVTRGDVILDTPLAKVGGKGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVGTCSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOLS (Porphobilinogen deaminase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ T+++L A +P + +++V IKT GDKIL PLA +GGKGLF KEI+EA++ +ID+AVHSMKDVPT PE L +RED RDAFI G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWTKSELEARYPGIQ----VELVKIKTMGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDLAVHSMKDVPTEFPEGLGLVVTTKREDPRDAFISDKVTFSELR-QGARIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ACIF5 (Porphobilinogen deaminase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=hemC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR SPLA+ QA R L+ LHP +A ++I+ + T+GD +L PL +GGKGLF KEI++AL ++D+AVHSMKDVP P+ + + REDVRDAF+ P G+ VG++SLRR Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLHPGMA----VEIITMTTSGDVLLDAPLHALGGKGLFVKEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGARVGSSSLRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ACIF2 (Porphobilinogen deaminase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=hemC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR SPLA+ QA R L+ LHP +A ++I+ + T+GD +L PL +GGKGLF KEI++AL ++D+AVHSMKDVP P+ + + REDVRDAF+ P G+ VG++SLRR Sbjct: 5 LRIGTRASPLAVWQAEHVRAALLRLHPGMA----VEIITMTTSGDVLLDAPLHALGGKGLFVKEIEDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGARVGSSSLRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEF5 (Porphobilinogen deaminase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hemC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.744e-26 Identity = 66/131 (50.38%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PL+ IGGKGLF KE++ AL+ +Q DIAVHSMKDVP PE L C +RED RDAF+ P GS+VGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLQEAHPGLV----VTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPEGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ACTSZ (Porphobilinogen deaminase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=hemC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.744e-26 Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 I++I TR SPLAL QA+ +++L ++P+L +++V + T GD IL PLA IGGKGLF KE++ AL+N DIAVHSMKDVP P L +RED RDAF+ P G+IVGT+SLRR Sbjct: 5 ILKIATRQSPLALWQANFVKDRLTEIYPDLT----VELVPMVTKGDVILDTPLAKIGGKGLFVKELENALLNGDADIAVHSMKDVPMEFPAGLGLSVICKREDPRDAFVSNRYRTLDDLPPGAIVGTSSLRR 132 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |