FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_METCA (Porphobilinogen deaminase OS=Methylococcus capsulatus GN=hemC PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 63/131 (48.09%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RI TR SPLAL QA ++L A HP+L +++V + T GDK+L PLA +GGKGLF KE+++ L+ + DIAVHSMKDVP PE L L+RED RDA + PA + +GT+SLRR Sbjct: 18 LRIATRKSPLALWQAEYVASRLRAAHPDLR----VELVGMTTRGDKLLDAPLAKVGGKGLFVKELEQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADARIGTSSLRR 144
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOSM (Porphobilinogen deaminase OS=Geobacter sp. (strain M21) GN=hemC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ +++L +P++ + + IKT GDKIL PLA +GGKGLF KEI+EA++ +IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPDMT----VTLTKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVI-SNNVKFADLPQGARIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOBB (Porphobilinogen deaminase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ +++L +P++ + + IKT GDKIL PLA +GGKGLF KEI+EA++ +IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPDMT----VTLTKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVI-SNGVKFADLPQGARIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOSF (Porphobilinogen deaminase OS=Geobacter sp. (strain FRC-32) GN=hemC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26 Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ +++L +P + + +V IKT GDKIL PLA +GGKGLF KEI+EA++ IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWVKSELEQRYPGME----VSLVKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVI-SRGTKFADLPQGAKIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SHEWM (Porphobilinogen deaminase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hemC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 63/132 (47.73%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +IRI TR SPLAL QA + +L HP+L ++++ + T GD IL PLA +GGKGLF KE++ A++ ++ DIAVHSMKDVP PE L +RED RDAF+ P G++VGT+SLRR Sbjct: 5 VIRIATRKSPLALWQAEFVKAELEKFHPDLT----VELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISELPKGAVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PASMU (Porphobilinogen deaminase OS=Pasteurella multocida GN=hemC PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RI TR SPLAL QA+ + L +H L +++V + T GD IL PLA IGGKGLF KE+++AL+ + DIAVHSMKDVP P +L QRED RDAF+ PAG++VGT+SLRR Sbjct: 7 LRIATRQSPLALWQANYVKACLEKIHAGLV----VELVPMVTKGDVILDTPLAKIGGKGLFVKELEQALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLMELPAGAVVGTSSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HYPNA (Porphobilinogen deaminase OS=Hyphomonas neptunium (strain ATCC 15444) GN=hemC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 64/133 (48.12%), Postives = 86/133 (64.66%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAI--QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +R+GTRGSPLALAQAH+ + + A A GA +IV TTGDK+ ++ L + GGKGLFT+E+D+AL ++D+AVHS+KDVP+ LP I +RED RD F+ P G+ +GTASLRR Sbjct: 13 LRLGTRGSPLALAQAHQIADGIRA-----ASAGAYDCEIVAFTTTGDKLTTERLINSGGKGLFTRELDDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPEGATLGTASLRR 140
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_GEOUR (Porphobilinogen deaminase OS=Geobacter uraniireducens (strain Rf4) GN=hemC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RIGTR S LAL QA+ +++L +P L + ++ IKT GDKIL PLA +GGKGLF KEI+EA++ IDIAVHSMKDVPT PE L C +RED RDA I P G+ +GT++LRR Sbjct: 6 LRIGTRASQLALWQANWVKSELEKRYPGLE----VSLLKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVI-SRGIKFADLPKGAKIGTSALRR 131
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ERWT9 (Porphobilinogen deaminase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=hemC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLKYS 740 I+RI TR SPLAL QA + +L+A HP L ++++ + T GD IL PLA +GGKGLF KE+++A+++ DIAVHSMKDVP P L +RED DAF+ P G+IVGT+SLRR + S Sbjct: 5 ILRIATRRSPLALWQAEYVQRRLIACHPGLR----VELLPMVTRGDVILDTPLAKVGGKGLFVKELEQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDSLPQGAIVGTSSLRRQCQLS 137
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_CAMFF (Porphobilinogen deaminase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=hemC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25 Identity = 63/134 (47.01%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 I+I +R S LAL Q H R+ L +AQ +++I+ +KT GD IL PLA IGGKGLFTKE++ +++ DIAVHS+KDVPT P+ L C REDVRDA + P G+ VGT SLRR ++ Sbjct: 3 IKIASRNSALALWQTHHIRDLL------IAQGHSVEIITMKTKGDVILDTPLAKIGGKGLFTKELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDAMLSMKYKNLDELPQGAKVGTTSLRRKMQ 130 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |