FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SYNAS (Porphobilinogen deaminase OS=Syntrophus aciditrophicus (strain SB) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRSLK 734 ++IGTRGS LAL Q + +L +PE+ ++IV+IKT+GD PLA IGGKGLF KEI+EAL+ +D+AVHSMKD+P LPE + +RED RD I PAG+ +GT SLRRS++ Sbjct: 1 MKIGTRGSALALTQTRQIAARLQGQYPEMH----LEIVVIKTSGDIQKDVPLAKIGGKGLFIKEIEEALLAGTVDLAVHSMKDLPAELPEGLQIAAVPRREDPRDVLISGICREFDNLPAGARIGTGSLRRSVQ 130
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEPK (Porphobilinogen deaminase OS=Pseudomonas putida (strain KT2440) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 67/131 (51.15%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L H L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHTGLQ----VTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEP1 (Porphobilinogen deaminase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 67/131 (51.15%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L H L + +V + + GDK+L PLA IGGKGLF KE++ AL++++ DIAVHSMKDVP PE L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHTGLQ----VTLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLETLPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEFS (Porphobilinogen deaminase OS=Pseudomonas fluorescens (strain SBW25) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 66/131 (50.38%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PL+ IGGKGLF KE++ AL+ ++ DIAVHSMKDVP PE L C +RED RDAF+ P GSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLK----VSLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDALPLGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HAES2 (Porphobilinogen deaminase OS=Haemophilus somnus (strain 2336) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++I TR SPLAL QA+ +N+L + L+ +++V I T GD IL PLA IGGKGLF KE++ AL+N + DIAVHSMKDVP P+ L RED RDAF+ P G+IVGT+SLRR Sbjct: 7 LKIATRQSPLALWQANYVKNRLQQRYSHLS----VELVPIITKGDVILDTPLAKIGGKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLDELPQGAIVGTSSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_HAES1 (Porphobilinogen deaminase OS=Haemophilus somnus (strain 129Pt) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++I TR SPLAL QA+ +N+L + L+ +++V I T GD IL PLA IGGKGLF KE++ AL+N + DIAVHSMKDVP P+ L RED RDAF+ P G+IVGT+SLRR Sbjct: 7 LKIATRQSPLALWQANYVKNRLQQRYSHLS----VELVPIITKGDVILDTPLAKIGGKGLFVKELENALLNGEADIAVHSMKDVPMQFPKGLELSVICPREDPRDAFVSNKYRTLDELPQGAIVGTSSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ENT38 (Porphobilinogen deaminase OS=Enterobacter sp. (strain 638) GN=hemC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++RI TR SPLAL QA + +L A H L +++V + T GD IL PLA +GGKGLF KE++ AL+ ++ DIAVHSMKDVP PE L +RED RDAF+ P GS+VGT+SLRR Sbjct: 5 VLRIATRQSPLALWQAQYVKQRLEACHQGLR----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYASLDDLPKGSVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSEU2 (Porphobilinogen deaminase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hemC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.803e-25 Identity = 66/131 (50.38%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PL+ IGGKGLF KE++ AL+ + DIAVHSMKDVP P+ L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLL----VTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQLPAGSIVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_SHEFN (Porphobilinogen deaminase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hemC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25 Identity = 63/132 (47.73%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 330 IIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IIRI TR SPLA+ QA + +L +HP L ++++ + T GD IL PLA IGGKGLF KE++ A++ ++ DIAVHSMKD+P PE L +RED RDAF+ P G++VGT+SLRR Sbjct: 5 IIRIATRKSPLAMWQAEFVKAELERIHPGLT----VELLPMSTKGDVILDTPLAKIGGKGLFVKELEVAMLENRADIAVHSMKDLPVEFPEGLGLQVICEREDPRDAFVSNNYKSISELPQGAVVGTSSLRR 132
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PSESM (Porphobilinogen deaminase OS=Pseudomonas syringae pv. tomato GN=hemC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25 Identity = 66/131 (50.38%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRI TR S LAL QA + +L HP L + +V + + GDK+L PL+ IGGKGLF KE++ AL+ DIAVHSMKDVP P+ L C +RED RDAF+ PAGSIVGT+SLRR Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHPGLL----VTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDALPAGSIVGTSSLRR 132 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |