FC869228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869228 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 62 MQIFVKTLTGKTITLEVESSNTIDNVKAKIQDKEGIPPDQQCLFFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 289 M I VKTLTGK I L+++ ++ + +K ++++KEGIPP QQ L +AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 71.2478 bits (173), Expect = 2.687e-12 Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = 2 Query: 290 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAGYNIQ 475 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLE 62
BLAST of FC869228 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 62 MQIFVKTLTGKTITLEVESSNTIDNVKAKIQDKEGIPPDQQCLFFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 289 M + VKTLTGK I++E++ S+ + ++K +++KEGIPP QQ L F GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of FC869228 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12 Identity = 43/143 (30.07%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 68 IFVKTLTGKTITLEVESSNTIDNVKAKIQDKEGIPPDQQCLFFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAGYNIQK 478 + V++ +T + +++ +K ++ K +P Q L K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +A Y I+K Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRK 152
BLAST of FC869228 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 5.987e-12 Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 74 VKTLTGKTITLEVESSNTIDNVKAKIQDKEGIPPDQQCLFFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAGYNIQKEST 487 VK L G + V +S T+ +K +I K G+P QQ L L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L Y ++ + T Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCT 145 The following BLAST results are available for this feature:
BLAST of FC869228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869228 ID=FC869228; Name=FC869228; organism=Citrus clementina; type=EST; length=489bpback to top |