FC869230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2) HSP 1 Score: 286.189 bits (731), Expect = 1.118e-76 Identity = 145/217 (66.82%), Postives = 165/217 (76.04%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPD 655 +IIAIL+DGTIMTISKDRVKPSP PDSWKL EIF TG+VLG Y A+MTVIFFWAA+KTDFF FGV ++ H+ L A+YLQVS ISQALIFVTRSRSWSFVERPG LL++AFLIAQLIATLIAVYANW F LY+I+ Y PLD KF IRY LSG+AW + E + AFT +KD+GKE+RE QWA AQRTLHGLQP + Sbjct: 677 LIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHE----LMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKE 889
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2) HSP 1 Score: 285.034 bits (728), Expect = 2.491e-76 Identity = 140/218 (64.22%), Postives = 165/218 (75.69%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDT 658 +IIAIL+DGTIMTISKDRVKPSP PDSWKL EIF TG+VLG Y+A+MTV+FFWAAYKTDFFPR F V L + H+ + SA+YLQVS +SQALIFVTRSRSWSF ERPG LL+AF +AQLIAT IAVY NW F LY+I+FY PLD +KF IRY L+G AW +I+ R AFT ++++G E+RE QWAHAQRTLHGLQ +T Sbjct: 678 LIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHE----MMSALYLQVSIVSQALIFVTRSRSWSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTET 891
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.491e-76 Identity = 139/217 (64.06%), Postives = 172/217 (79.26%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPD 655 +IIAIL+DGTIMTISKDRVKPSPLPDSWKL EIF TG+VLG+YLA++TV+FFW +KTDFF FGV ++ T +F+++ SA+YLQVS +SQALIFVTRSRSWSFVERPG LL+ AFL+AQL+ATLIAVYANW F L++I+FY PLD KFFIR+ LSGRAWD +++ + AFT ++++GK +RE QWA AQRTLHGLQ P+ Sbjct: 677 LIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALVTVVFFWLIHKTDFFTNKFGVESIRNT---EFKEM-SALYLQVSIVSQALIFVTRSRSWSFVERPGFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPE 889
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 8.861e-74 Identity = 135/218 (61.93%), Postives = 168/218 (77.06%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDT 658 +IIAIL+DGTIMTISKDRVKPSP+PDSWKL EIF TG+VLG+Y+A++TV+FFW A+ T FF FGV +L+ + L + +YLQVS ISQALIFVTRSRSWSFVERPG+LLL+AF +AQLIATLIA YA+W F +Y+I+ YIPLD +KF RY LSG+AW+ +IE R AFT +KD+G+ +RE QWA AQRTLHGL+PP++ Sbjct: 679 LIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVTVVFFWLAHDTTFFSDKFGVRSLQGKDEE----LIAVLYLQVSIISQALIFVTRSRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES 892
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3) HSP 1 Score: 274.248 bits (700), Expect = 4.398e-73 Identity = 138/217 (63.59%), Postives = 165/217 (76.04%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPD 655 +IIAIL+DGTIMTISKDRVKPSP PDSWKL EIF TGIVLG Y A+M+VIFFWAA+KTDFF FGV ++ D+ +L A+YLQVS ISQALIFVTRSRSWSFVERPG LL++AF+IAQL+ATLIAVYA+W+F +Y+I+ Y P D +KF IRY LSG+AW + + R AFT +KD+G +RE QWA AQRTLHGLQP + Sbjct: 677 LIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIMSVIFFWAAHKTDFFSDKFGVRSIR----DNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKE 889
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3) HSP 1 Score: 266.159 bits (679), Expect = 1.198e-70 Identity = 133/217 (61.29%), Postives = 162/217 (74.65%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPD 655 +IIAIL+DGTIMTISKDR+KPSP PDSWKL +IF+TG+VLG Y A+MTV+FFW +DFF FGV L + ++ +A+YLQVS ISQALIFVTRSRSWS+ E PG+LLL AF+IAQL+AT IAVYANWSF LY+ + YIPLD +KF IRY LSG+AW ++E + AFT +KD+GKE+RE QWA AQRTLHGLQP + Sbjct: 677 LIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALMTVVFFWVMKDSDFFSNYFGVRPLSQRPE----QMMAALYLQVSIISQALIFVTRSRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAE 889
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.583e-69 Identity = 135/241 (56.02%), Postives = 172/241 (71.37%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATL---------EKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQ----PPDTRCSPSELMNL 688 ++IAIL+DGTIMTISKDRVKPSP PD WKL EIF TG+VLG+YLA+MTV+FFWAAY+T+FF +F V +K A ++ASA+YLQVSTISQALIFVTRSRSWSFVERPG LL++AFLIAQL+A++I+ ANW F ++NI+ Y+ LD IKF +RYALSG++WD ++E R A T +K+FG+E+R WA +RT HGL+ P R S +EL N+ Sbjct: 677 LVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVYERNSATELNNM 917
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA10_ARATH (ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 2.503e-60 Identity = 119/209 (56.94%), Postives = 153/209 (73.21%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRT 631 +IIAIL+DGTIMTISKDRV+PSP P+SWKL +IF TGIV+G+YLA++TV+F+W T FF + F V K+ ++ +++SA+YLQVS ISQALIFVTRSR WSF ERPG LL+ AF++AQL ATLIAVYAN SF LY++IFYIPLD IKF YALSG AW+LV++++ AFT +KD+GK+ +QR+ Sbjct: 684 LIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVTVLFYWIIVSTTFFEKHFHV----KSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRS 888
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMAX_ARATH (Putative ATPase, plasma membrane-like OS=Arabidopsis thaliana GN=At4g11730 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43 Identity = 93/181 (51.38%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRV-KPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSFXXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGRAWDL 544 + IA+L++ T I+ D V PSP PDS KL EIF TG+V GSY+A++TV+FFWAAY+TD FPR F V L + ++ A+YLQVS +SQAL FV +SRSW FVERPG LL ++F+ Q IAT +AVYA+W LYNIIF+ PLD +KF IRY L+G+A L Sbjct: 589 LAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDL----RGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSL 765
BLAST of FC869230 vs. ExPASy Swiss-Prot
Match: PMA1_DICDI (Probable plasma membrane ATPase OS=Dictyostelium discoideum GN=patB PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24 Identity = 67/191 (35.08%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 5 IIIAILHDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGILLLVAFLIAQLIATLIAVYANWSF---------------XXXXXXXXXXXXXXXLYNIIFYIPLDFIKFFIRYALSGR 532 +IIAIL+DGT++TISKDRV+ PD W L E+FT + G YL T++FF + +F + L +L IYLQVS A IFV+RS+ +S+ ERPG L++ AF+++Q++AT I VY + ++ ++YIP+DFIK + Y L G+ Sbjct: 817 VIIAILNDGTMLTISKDRVRARNEPDQWNLFEVFTMALCYGFYLVGSTIVFFAIIHDGTWFHDAINLRILTD------NELRGLIYLQVSISGLATIFVSRSQGFSYFERPGNLVIFAFVMSQIVATFIGVYGFRGYPHDSFSDNPDYPVHGTNFQGCGWGWAVCAWIWCFLWYIPMDFIKLGVTYILRGK 1001 The following BLAST results are available for this feature:
BLAST of FC869230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869230 ID=FC869230; Name=FC869230; organism=Citrus clementina; type=EST; length=689bpback to top |