FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH2_BACSU (Probable aldehyde dehydrogenase ywdH OS=Bacillus subtilis GN=ywdH PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.620e-49
Identity = 98/232 (42.24%), Postives = 143/232 (61.64%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYG 697
            D++ AL QDL K E E+   E+ ++   I   +K L+ W  P++ KT +T   S + I+PEP+G VL+I+PWNYP  L+L P++GAIAAGN +VLKPSE  PA S++L+KL+        + + EG    ++ALL Q +D I +TG+  V +IVM AAAK L PV LELGGKSP +     ++++A +R++ GK+  N GQ CI+PD++   +D               FYG
Sbjct:   43 DLIAALYQDLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGSKSIIIPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAILSKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIVMEAAAKQLIPVTLELGGKSPCIVHKDADIQLAAKRIVFGKF-TNAGQTCIAPDYLFVHEDIKTKLTEEMKRAIREFYG 273          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3B1_MOUSE (Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.610e-49
Identity = 101/229 (44.10%), Postives = 144/229 (62.88%), Query Frame = 2
Query:   11 DALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYG 697
            +AL QDL K   E+ + E+A+ +  +  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLII PWNYP  L+L P+VGAIAAGN +VLKPSE++ A+  +LA+++  Y+D S   VV G   ET  LL+ K+D I +TGN+ V +IVMAAAAKHLTP+ LELGGK+P   D   + ++   R+   ++  N GQ C++PD+I+ +++               FYG
Sbjct:   46 EALAQDLHKSAFEAEVSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFTGNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRY-FNAGQTCVAPDYILCSQEMQERLVPALQNAITRFYG 273          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3B1_RAT (Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 100/229 (43.67%), Postives = 143/229 (62.45%), Query Frame = 2
Query:   11 DALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYG 697
            +AL QDL K   ES + E+A+ +  +  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLII PWNYP  L+L P+VGAIAAGN +VLKPSE++ A+  +LA+++  Y+D S   VV G   ET  LL+ ++D I +TGN+ V +IVMAAAAKHLTP+ LELGGK+P   D   + +    R+   ++  N GQ C++PD+++ +++               FYG
Sbjct:   46 EALAQDLHKSAFESEVSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFTGNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRY-FNAGQTCVAPDYVLCSQEMQERLVPALQNAITRFYG 273          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A1_MOUSE (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.056e-48
Identity = 108/237 (45.57%), Postives = 141/237 (59.49%), Query Frame = 2
Query:    5 IVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            I  AL  +L K E  S   EVA +   I   +K L  W   E    +  T      I  EP GVVL+I  WNYPF L++ P+VGAIAAGNA+VLKPSEV+   + LL+ L+ +YMD     V++G V ET+ LL +K+D I YTG++ V +IVMAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+                   FYG+ + +S
Sbjct:   44 ISKALASNLRKNEWTSYYEEVAHVLDEIDFTIKGLSDWAEDEPVGKTRQTQEDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAIAAGNAVVLKPSEVSDHMADLLSTLIPQYMDKDLYPVIKGGVPETTELLKEKFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNEIVEKLKKSLKDFYGEDAKQS 279          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A1_HUMAN (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.056e-48
Identity = 102/238 (42.86%), Postives = 144/238 (60.50%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            ++V AL  DL K E  +   EV  +   I+  +++L  W   E  + +  T      I  EP GVVL+I  WNYPF L++ P+VGAIAAGNA+VLKPSE++   +SLLA ++ +Y+D     V+ G V ET+ LL +++D I YTG++ V +I+M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+                   FYG+ + +S
Sbjct:   43 ELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKS 279          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A1_CANFA (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.212e-48
Identity = 98/238 (41.18%), Postives = 143/238 (60.08%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            D+  AL  DL K E  +   EV  +   I+  +K+L  W   E  + +  T      I  EP GVVLII  WNYPF +++ P+VGAIAAGNA+V+KPSE++   ++LLA ++ +Y+D     V+ G + ET+ LL +++D I YTGN+ V +++M AAAKHLTPV LELGGK+P   D   +L +ACRR+  GK+  N+GQ C++PD+I+                   FYG+ + +S
Sbjct:   43 DLAGALTADLHKNEWNAYYEEVVYVLEEIEYMIKKLPEWAADEPVEKTPQTQQDECYIHSEPLGVVLIIGTWNYPFTVTIQPMVGAIAAGNAVVIKPSELSENMANLLATIIPQYLDRDLYPVISGGIPETTELLKERFDHILYTGNTAVGKVIMMAAAKHLTPVTLELGGKNPCYVDKDCDLDIACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKALKEFYGEDAKKS 279          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3B1_BOVIN (Aldehyde dehydrogenase family 3 member B1 OS=Bos taurus GN=ALDH3B1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.891e-48
Identity = 99/229 (43.23%), Postives = 140/229 (61.14%), Query Frame = 2
Query:   11 DALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYG 697
            +AL QDL K   E+ + E+++ +  I  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLI+SPWNYP  LSL P+VGA+AAGN +VLKPSE++  +  +LA+++  Y+D S   VV G   ET  LL+ K+D I +TGN +V +IVM AAAKHLTPV LELGGK+P   D   + +    R+   +   N GQ C++PD+++ + +               FYG
Sbjct:   46 EALAQDLHKSAFEAEVSEISISQNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNLSLGPLVGALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHKFDYIFFTGNPQVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAFFRC-FNAGQTCVAPDYVLCSPEMQAQLVPALQSAITRFYG 273          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3B1_HUMAN (Aldehyde dehydrogenase family 3 member B1 OS=Homo sapiens GN=ALDH3B1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.378e-47
Identity = 99/229 (43.23%), Postives = 141/229 (61.57%), Query Frame = 2
Query:   11 DALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYG 697
            DAL QDL K   ES + EVA+ +  +  AL+ L+ WM  E+   ++ T   SA I  EPFG+VLII+PWNYP  L+L P+VGA+AAGN +VLKPSE++     +LA+++ +Y+D S   VV G   ET  LL+ ++D I +TG+ RV +IVM AAAKHLTPV LELGGK+P   D   + +    R+   ++  N GQ C++PD+++ + +               FYG
Sbjct:   46 DALAQDLHKSAFESEVSEVAISQGEVTLALRNLRAWMKDERVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVGALAAGNCVVLKPSEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFTGSPRVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAWFRY-FNAGQTCVAPDYVLCSPEMQERLLPALQSTITRFYG 273          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_PSEOL (Aldehyde dehydrogenase OS=Pseudomonas oleovorans GN=alkH PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 94/233 (40.34%), Postives = 135/233 (57.94%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGK 700
            +I+ AL  D  KP  E  + E+  +   I  A + LK WM P + + +++   + A +  EP GV LII+PWNYPF LS  P+V A+AAGN++V+KPSE+ P +++L+  +V E   +  + VVEG  A +  LL   +D I +TG+ RV ++VM AA+K L  V LELGGKSP +     NL  A R ++ GK+  NNGQ CI+PDH+   +  A              YGK
Sbjct:   59 EIIAALAADFRKPASEVKLTEIFPVLQEINHAKRNLKDWMKPRRVRAALSVAGTRAGLRYEPKGVCLIIAPWNYPFNLSFGPLVSALAAGNSVVIKPSELTPHTATLIGSIVREAFSVDLVAVVEGDAAVSQELLALPFDHIFFTGSPRVGKLVMEAASKTLASVTLELGGKSPTIIGPTANLPKAARNIVWGKFS-NNGQTCIAPDHVFVHRCIAQKFNEILVKEIVRVYGK 290          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH3_BACSU (Probable aldehyde dehydrogenase aldX OS=Bacillus subtilis GN=aldX PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40
Identity = 83/214 (38.79%), Postives = 138/214 (64.49%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            +I++A+ +D+ KP  E    E+   K +I+  +  L+ WM P++  +S++   ++  ++ EP GV LI+ PWNYPF+L++ P+  ++AAGN+ ++K S+    +S++ AK++ +  D   + + EG V   + LLDQ +D I +TG++ V +IVM AAAKHL  V LELGGKSP + DS  +L  A +++ +GK+  N GQ CI+PD++   KD
Sbjct:   48 EIIEAIRKDVRKPYHEVKKAEIEGTKKAIRDNMNNLEQWMAPKEVGSSLSP-DANGILMYEPKGVTLILGPWNYPFMLTMAPLAASLAAGNSAIVKLSDFTMNTSNIAAKVIRDAFDEKEVAIFEGEVEVATELLDQPFDHIFFTGSTNVGKIVMTAAAKHLASVTLELGGKSPTIIDSEYDLMDAAKKIAVGKF-VNAGQTCIAPDYLFIKKD 259          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
ALDH2_BACSU1.620e-4942.24Probable aldehyde dehydrogenase ywdH OS=Bacillus s... [more]
AL3B1_MOUSE3.610e-4944.10Aldehyde dehydrogenase family 3 member B1 OS=Mus m... [more]
AL3B1_RAT8.041e-4943.67Aldehyde dehydrogenase family 3 member B1 OS=Rattu... [more]
AL3A1_MOUSE3.056e-4845.57Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_HUMAN3.056e-4842.86Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_CANFA5.212e-4841.18Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3B1_BOVIN8.891e-4843.23Aldehyde dehydrogenase family 3 member B1 OS=Bos t... [more]
AL3B1_HUMAN3.378e-4743.23Aldehyde dehydrogenase family 3 member B1 OS=Homo ... [more]
ALDH_PSEOL1.735e-4340.34Aldehyde dehydrogenase OS=Pseudomonas oleovorans G... [more]
ALDH3_BACSU1.053e-4038.79Probable aldehyde dehydrogenase aldX OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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