FC869235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 EP GVV I WNYP +++ A+AAGNA+V KPSEV P ++ LA++ E + VV+G E L + +KI +TG + VMA AA+ L V +ELGGKSP+V +L A +M + ++GQ C + + + Sbjct: 141 EPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVMANF-FSSGQVCTNGTRVFVPR 296
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGGGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 176 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 + EP G+ + I WNYP ++ A+A GNA+V KPSEV P + LA+++ E + VV+G A +AL+ D + K+ TG+ R V AAAA+ + V +ELGGKSP++ +L+ A ++G + + GQ C + + K Sbjct: 138 IREPLGLCVGIGAWNYPSQIACWKAAPALALGNAMVFKPSEVTPLGALKLAEILIEAGLPPGLFNVVQGRGAVGAALVTDSRVAKVSLTGSVPTGRRVYAAAAEGVRHVTMELGGKSPLIVFDDADLESAIGAAMLGNF-YSAGQICSNGTRVFVQK 293
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECO8A (Betaine aldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286 The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bpback to top |