FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_ECOLI (Lactaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=aldA PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 47/153 (30.72%), Postives = 77/153 (50.33%), Query Frame = 2
Query:  191 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            GV   I PWN+PF L    +  A+  GN +V+KPSE  P ++   AK+V E      + ++ +  G         + K   +  TG+      +MA AAK++T V LELGGK+P +     +L++A + ++  +   N+GQ C   + +   K
Sbjct:  144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSR-VINSGQVCNCAERVYVQK 295          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++  E  +      V+ G+  E    L +    +KI +TG +   + VMA A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVC 286          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++  E  +      V+ G+  E    L +    +KI +TG +   + VMA A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTTLKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVC 286          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++  E  +      V+ G+  E    L +    +KI +TG +   + VMA A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVC 286          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++  E  +      V+ G+  E    L +    +KI +TG +   + VMA A++  L  V +ELGGKSP++     +L  A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVC 286          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH5_BACSU (Putative aldehyde dehydrogenase yfmT OS=Bacillus subtilis GN=yfmT PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 63/218 (28.90%), Postives = 109/218 (50.00%), Query Frame = 2
Query:    5 IVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP-ASSSLLAKL---VGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            I+  ++++L    L+++ +E+ L+K  IK A         P + +  I   PS+ +     +   P GVV +ISP+N+PF LS+  V  A+ AGN +VLKP E  P    +L+AK+    G    L ++ V + A    S +       I +TG+++V   +   A KH    LLELGG S  +     +++ A    +  ++  + GQ C+S + ++
Sbjct:   87 IIYLIMEELGGTRLKAA-FEIGLVKNIIKEAAT------FPIRMEGKI--LPSTIDGKENRLYRVPAGVVGVISPFNFPFFLSMKSVAPALGAGNGVVLKPHEETPICGGTLIAKIFENAGIPAGLLNVVVTDIAEIGDSFVEHPVPRIISFTGSTKVGSYIGQLAMKHFKKPLLELGGNSAFIVLEDADIEYAVNAAVFSRF-THQGQICMSANRVL 294          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 62/201 (30.85%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   26 DLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQAC 610
            D  KP  +S+  EV +L        +    W       T     P   + + EP GV   I PWN+P L+    +  A+A GN +VLK +E  P S+ L+ KL+ E  +    + +V G  A   A +      DK+ +TG++ V +I++  A+K +L  V LELGGKSP +   D+ ++  V      +     N GQ C
Sbjct:  142 DNGKPYEQSAQIEVPMLAR----VFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFAL---FFNQGQCC 335          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14
Identity = 54/169 (31.95%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  152 TFPSSAEIV----PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP--VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 628
            T P+   +V     EP GV   I+PWN+P L+ +  +  A+  GN +VLKP+E  P ++  L  L+ E       + +V G      A +    + +KI +TG++ V ++V  AA++ +L  V LELGGK+P  V  D+ ++L V C    +     N GQ C +   +
Sbjct:  155 TIPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTALYLGSLIKEAGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGV---FFNQGQCCTAASRV 320          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 59/195 (30.26%), Postives = 94/195 (48.21%), Query Frame = 2
Query:   71 LLKTSIK-SALKELKHWMTPEKAKTSITTFPSSAEIVP----EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 628
            LL T +   ALK    W      K    T PS  ++      EP GV   I PWN P +L +  +  A++ GN +++KP+E  P ++  +A L+ E       + VV G  +   A +      DK+ +TG++ V +++  AA K +L  V LELGGKSP +  +  +L  A      G +  + GQ C++   +
Sbjct:  120 LLDTEVSIKALKYFAGWAD----KIHGQTIPSDGDVFTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVF-FHQGQICVAASRL 309          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: GABD_RHISN (Probable succinate-semialdehyde dehydrogenase [NADP+] OS=Rhizobium sp. (strain NGR234) GN=gabD PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14
Identity = 50/157 (31.85%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  173 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP---ASSSLLAKLVGEYMD--LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 628
            ++ +P GVV  I+PWN+P  +    +  A+AAG  +VLKP+E  P    +   LAKL G + D  L+ +   EG         + K  KI +TG++ V R++M   +  +  +  ELGG +P +     ++  A    I  K+  N GQ C+S + I
Sbjct:  149 VIKQPIGVVGAITPWNFPASMVARKISPALAAGCTVVLKPAEQTPLVAGAMFALAKLAG-FPDGVLNLVYASEGDAIGRELCTNPKVRKISFTGSTEVGRLLMRQCSDQIKRISFELGGNAPFIVFDDADIDAAVDGAIQAKFR-NAGQTCVSANRI 303          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
ALDA_ECOLI3.770e-1430.72Lactaldehyde dehydrogenase OS=Escherichia coli (st... [more]
BETB_PSEAE4.924e-1436.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEAB4.924e-1436.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA84.924e-1436.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA74.924e-1436.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
ALDH5_BACSU4.924e-1428.90Putative aldehyde dehydrogenase yfmT OS=Bacillus s... [more]
AL2B7_ARATH4.924e-1430.85Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
AL1A3_HUMAN4.924e-1431.95Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
AL1A7_RAT6.431e-1430.26Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
GABD_RHISN8.399e-1431.85Probable succinate-semialdehyde dehydrogenase [NAD... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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