FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH3_DICDI (Aldehyde dehydrogenase family 3 comG OS=Dictyostelium discoideum GN=comG PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 93/235 (39.57%), Postives = 133/235 (56.60%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGK 700
            +I  A+ +DL K E E    E+ +++T +   +  L+ W   EK  + +   P+S+ I+ EP GVVLI+SPWNYP  L+L P++GAIA GN  +LK S  +   S LL  L+ +Y+D        EG     + LL+ KWD I +TG+ +V +IV  AAAK LTPV LELGGK+P + D   ++K+  RR+I GK W  N GQ CI  D++I  K                F+G+
Sbjct:   50 NITAAVKKDLGKHEFEIHQTEIVMIQTELDETISHLESWNKTEKVYSPLHFKPASSYILKEPLGVVLIMSPWNYPVNLALIPLIGAIAGGNCALLKLSRHSYNISKLLHGLLTKYLDPECFEFDCEGGAPYITELLEYKWDHIFFTGSVKVGKIVYQAAAKFLTPVTLELGGKNPCIVDKDTDIKLTARRLIWGKCW--NAGQTCIGLDYLIVHKSILEPLIEEFKVVLKEFFGE 282          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3B2_HUMAN (Aldehyde dehydrogenase family 3 member B2 OS=Homo sapiens GN=ALDH3B2 PE=2 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 4.577e-36
Identity = 82/195 (42.05%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  119 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYG 697
            M  E   T++     S  I  EPFG+VLII+PWNYP  L+L  +VGA+AAG+ +VLKPSE++  +  +LA+++ +Y+D S   VV G   ET  LL+ K D I +TG+ RV +IVM AA KHLTPV LELGGK+P   D   + +    R+    W C  N GQ C++PD+++ + +               FYG
Sbjct:    1 MKDEPRSTNLFMKLDSVFIWKEPFGLVLIIAPWNYPLNLTLVLLVGALAAGSCVVLKPSEISQGTEKVLAEVLPQYLDQSCFAVVLGGPQETGQLLEHKLDYIFFTGSPRVGKIVMTAATKHLTPVTLELGGKNPCYVDDNCDPQTVANRV---AWFCYFNAGQTCVAPDYVLCSPEMQERLLPALQSTITRFYG 192          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: CALB_PSEAE (Probable coniferyl aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=calB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34
Identity = 81/211 (38.39%), Postives = 119/211 (56.40%), Query Frame = 2
Query:   14 ALLQDLDKPELESSIYEVALLKT-----SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            AL++ +D+     S  E  L +       I  A K +K WM P +    +   P+SA++V +P GVV +I PWNYP  LS+ P+ GA+AAGN +++K SE  PA+  LL  L+        + VV G V    A     +D + +TG + V + VM AAA++LTPV LELGGKSP +    + +K A  R+  GK   N GQ C++PD+++
Sbjct:   57 ALIEAIDRDFSARSADETLLAEIMPSLHGIHYAAKRVKKWMKPARRAVGLQFQPASAQVVYQPLGVVGVIVPWNYPLFLSIGPLTGALAAGNRVMIKMSESTPATGRLLKDLLARIFPEDQVAVVLGEVDVGVAFSKLPFDHLLFTGATSVGKHVMRAAAENLTPVTLELGGKSPAIVSDSVPMKDAAERIAFGK-SLNAGQTCVAPDYVL 266          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: HFD1_YEAST (Putative fatty aldehyde dehydrogenase HFD1 OS=Saccharomyces cerevisiae GN=HFD1 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.472e-34
Identity = 90/238 (37.82%), Postives = 135/238 (56.72%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPE-PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--GEYMDLSSIRVVEGAVAETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFY 694
            +++DA+ +D  + ++ES + E   L   I   ++ L   + P +   S   F     IV +   G VLII+P+N+P LL+  P+  A+AAGN +VLKPSE+ P ++ ++  L+    + D   I+VV+GA+ ET+ LLD  K+D I YTG+ RV  IV   AAK LTP +LELGGKSP          N+K+A +R+  G +G N+GQ C+SPD+++  K   P            FY
Sbjct:   66 ELIDAMYKDFHRNKIESVLNETTKLMNDILHLIEILPKLIKPRRVSDSSPPFMFGKTIVEKISRGSVLIIAPFNFPLLLAFAPLAAALAAGNTIVLKPSELTPHTAVVMENLLTTAGFPD-GLIQVVQGAIDETTRLLDCGKFDLIFYTGSPRVGSIVAEKAAKSLTPCVLELGGKSPTFITENFKASNIKIALKRIFFGAFG-NSGQICVSPDYLLVHKSIYPKVIKECESVLNEFY 301          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: CALB_PSEUH (Coniferyl aldehyde dehydrogenase OS=Pseudomonas sp. (strain HR199 / DSM 7063) GN=calB PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33
Identity = 82/216 (37.96%), Postives = 127/216 (58.80%), Query Frame = 2
Query:    5 IVDALLQDLDKPELESSIY-EVALLKTSIKSALKELKHWMTPEKAKTSITTFPSS-AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            I DA+  D      E ++  ++A    S+K + + +  WM PE  K     FP + A +  +P GVV +ISPWN+P +L+  P+ G  AAGN  +LKPSE+ P +S+LLA+L+  Y D + +  V G  AE  AL   Q +D + +TG + VA+ +M AAA +L PV LELGGKSPV+     ++    +R++  K   N GQ C++PD+++  ++
Sbjct:   56 IADAVSADFGNRSREQTLLCDIAGSVASLKDSREHVAKWMEPEHHKAM---FPGAEARVEFQPLGVVGVISPWNFPIVLAFGPLAGIFAAGNRAMLKPSELTPRTSALLAELIARYFDETELTTVLGD-AEVGALFSAQPFDHLIFTGGTAVAKHIMRAAADNLVPVTLELGGKSPVIVSRSADMADVAQRVLTVK-TFNAGQICLAPDYVLLPEE 266          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: CALB_CAUCR (Probable coniferyl aldehyde dehydrogenase OS=Caulobacter crescentus GN=calB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33
Identity = 82/218 (37.61%), Postives = 124/218 (56.88%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELES-SIYEVALLKTSIKSALKELKHWMTPEKAKTS---ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            +I  A+ QD      E+ S+ +VA     +K A + L  WM PEK KT+   +  F + A +  +P GVV +ISPWN+P  L+  P+ G  AAGN  ++KPSE  PA+S LL  +  +  +   + V  G      A     +D + +TG + VA+ VM AAA++L PV LELGGKSPV+   G ++  A  R++ GK   N GQ C++PD+++  ++
Sbjct:   55 EIAKAVNQDFGSRSPEATSLTDVAGSIGPLKHAREHLTKWMKPEKHKTTPAILGLFGAKATVQWQPKGVVGVISPWNFPVNLTFAPLAGVFAAGNRAMIKPSEFTPATSDLLKAMFAKAFNEEEVAVFVGGPEVGQAFSGLAFDHLVFTGATSVAKHVMRAAAENLVPVTLELGGKSPVILSRGADMATAAARVMNGK-TLNAGQICLAPDYVLAPQE 271          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH1_ENTHI (Aldehyde dehydrogenase 1 OS=Entamoeba histolytica GN=ALDH1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26
Identity = 75/245 (30.61%), Postives = 123/245 (50.20%), Query Frame = 2
Query:    5 IVDALLQDLDKP------ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIR--VVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            I +A+ +DL +       E+ S I+E+  L+ ++   LK        ++  T        + +  EP+G V +ISPWN+P  LSL P  GA+A GN + LK S+ + A+S L+A+L  +Y+    +R   + G  A         +D   +TG++ V +++  AAA+ + P  LELGGK+P + D  +NLKVA +R+   K   N GQ C+  DH+   +                F+G+   +S
Sbjct:  107 ISNAIREDLHRDVGMCVAEVNSVIHEINFLRKNLNKYLKR-------KQVPTVCAQLFGKSFVEREPYGCVCVISPWNFPANLSLIPCAGALACGNTVFLKMSKYSMATSKLIAELCDKYIPSEYLRCEYLTGREA-IQECCSASFDYYFFTGSTYVGKLINQAAAEKMVPATLELGGKNPAIVDKSVNLKVAAKRIAWAK-SINAGQICVCVDHVFVPRSIKNEFCEAVKNSFIKFFGEDQKKS 342          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF------DSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  I PWN+P L+ +  +  A+AAGNA+VLKP+E  PAS  +L +L+ + +    + VV G   E    L    +  KI +TG +   R++M  AA +L PV LELGGKSP +F      +    L  A   M+M  +  N G+ C  P   +
Sbjct:  163 EPLGVVGQIIPWNFPLLMGVWKLAPALAAGNAVVLKPAEQTPASIMVLMELIADLLPEGVVNVVNGFGLEAGKPLASSPRIAKIAFTGETNTGRLIMGYAADNLIPVTLELGGKSPNIFFDDVMMEDDAFLDKAVEGMVM--FALNQGEVCTCPSRAL 318          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: THCA_RHOER (EPTC-inducible aldehyde dehydrogenase OS=Rhodococcus erythropolis GN=thcA PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 58/163 (35.58%), Postives = 87/163 (53.37%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-------WGCNNGQACISPDHIITTKD 643
            EP GVV  I PWN+P L+++  +  A+AAGNA+VLKP+E  P S   L  ++G+ +    + +V G   E    L    +  KI +TG +   R++M  A+++L PV LELGGKSP VF S +   +A       K       +  N G+ C +P   +  +D
Sbjct:  154 EPLGVVGQIIPWNFPILMAVWKLAPALAAGNAIVLKPAEQTPVSILHLIGIIGDLLPAGVLNIVNGFGVEAGKPLASSPRIKKIAFTGETTTGRLIMQYASQNLIPVTLELGGKSPNVFFSDV---LASNDDYQDKALEGFTMFALNQGEVCTAPSRALIQED 313          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_MYCTU (Probable aldehyde dehydrogenase OS=Mycobacterium tuberculosis GN=Rv0458 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.338e-19
Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL--KVACRRMIMG--KWGCNNGQACISPDHIITTKD 643
            EP GVV  I PWN+P L++   +  A+AAGN  VLKP+E  PAS   L  L+G+ +    + VV G  AE    L    +  K+ +TG +   R++M  A+ +L PV LELGGKSP +F + +       C + + G   +  N G+ C  P   +   D
Sbjct:  154 EPLGVVGQIIPWNFPILMAAWKLAPALAAGNTAVLKPAEQTPASVLYLMSLIGDLLPPGVVNVVNGFGAEAGKPLASSDRIAKVAFTGETTTGRLIMQYASHNLIPVTLELGGKSPNIFFADVLAAHDDFCDKALEGFTMFALNQGEVCTCPSRSLIQAD 313          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
ALDH3_DICDI1.985e-3939.57Aldehyde dehydrogenase family 3 comG OS=Dictyostel... [more]
AL3B2_HUMAN4.577e-3642.05Aldehyde dehydrogenase family 3 member B2 OS=Homo ... [more]
CALB_PSEAE1.127e-3438.39Probable coniferyl aldehyde dehydrogenase OS=Pseud... [more]
HFD1_YEAST1.472e-3437.82Putative fatty aldehyde dehydrogenase HFD1 OS=Sacc... [more]
CALB_PSEUH4.736e-3337.96Coniferyl aldehyde dehydrogenase OS=Pseudomonas sp... [more]
CALB_CAUCR8.079e-3337.61Probable coniferyl aldehyde dehydrogenase OS=Caulo... [more]
ALDH1_ENTHI2.517e-2630.61Aldehyde dehydrogenase 1 OS=Entamoeba histolytica ... [more]
ALDH_DEIRA1.580e-2037.97Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
THCA_RHOER1.338e-1935.58EPTC-inducible aldehyde dehydrogenase OS=Rhodococc... [more]
ALDH_MYCTU1.338e-1936.25Probable aldehyde dehydrogenase OS=Mycobacterium t... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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