FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSP-VVFD 535
            EP GV   I  WNYP  ++      A+AAGNA++ KPSEV P S+  LA++  E  +      VV+G      ALL       K+ +TG     + VM+ A A  L  V +ELGGKSP +VFD
Sbjct:  141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD-GSVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFD 262          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSP-VVFD 535
            EP GV   I  WNYP  ++      A+AAGNA++ KPSEV P S+  LA++  E  +      VV+G      ALL       K+ +TG     + VM+ A A  L  V +ELGGKSP +VFD
Sbjct:  141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD-GSVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFD 262          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSP-VVFD 535
            EP GV   I  WNYP  ++      A+AAGNA++ KPSEV P S+  LA++  E  +      VV+G      ALL       K+ +TG     + VM+ A A  L  V +ELGGKSP +VFD
Sbjct:  141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD-GSVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFD 262          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSP-VVFD 535
            EP GV   I  WNYP  ++      A+AAGNA++ KPSEV P S+  LA++  E  +      VV+G      ALL       K+ +TG     + VM+ A A  L  V +ELGGKSP +VFD
Sbjct:  141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD-GSVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFD 262          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSP-VVFD 535
            EP GV   I  WNYP  ++      A+AAGNA++ KPSEV P S+  LA++  E  +      VV+G      ALL       K+ +TG     + VM+ A A  L  V +ELGGKSP +VFD
Sbjct:  141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD-GSVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFD 262          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSP-VVFD 535
            EP GV   I  WNYP  ++      A+AAGNA++ KPSEV P S+  LA++  E  +      VV+G      ALL       K+ +TG     + VM+ A A  L  V +ELGGKSP +VFD
Sbjct:  141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD-GSVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFD 262          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ASTD_SHEPW (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=astD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 60/219 (27.40%), Postives = 101/219 (46.12%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            ++ + + Q+  KP+ E++    A++     S     K   T E       T    A +  +P GVV +  P+N+P  L    +V A+ AGN +V KPSE+ P  + L+ KL  +  +    I +V+G V    AL    + D + +TG+SR   I+    A     +L LE+GG +P++     + K A   +I   +  ++GQ C     +   K  A
Sbjct:   78 EMAEVIAQETGKPQWETATEAGAMIGKIGLSVAAFHKRTGTSEN-----DTPAGRAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKLWEKAGLPAGVINLVQGEVETGKALASHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKGVEDTKAAVHDIIQSAY-ISSGQRCTCARRLYVEKGAA 290          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL8A1_BOVIN (Aldehyde dehydrogenase family 8 member A1 OS=Bos taurus GN=ALDH8A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 45/158 (28.48%), Postives = 73/158 (46.20%), Query Frame = 2
Query:  176 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            V  P G+  +ISPWN P  L    +  AIAAGN ++ KPSE+   ++ ++ +L+   G    + +I    G     + +   +   I +TG+   A  +M  +A H   + LELGGK+P V     NL       +   +  N G+ C+    I   +
Sbjct:  141 VRAPVGIAALISPWNLPLYLLTWKIAPAIAAGNTVIAKPSELTSVTAWMMCRLLEKAGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERIMQLSAPHCKKLSLELGGKNPAVIFEDANLAECIPTTVRSSF-ANQGEICLCTSRIFVQR 297          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ABDH_SALPC (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=ydcW PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 40/130 (30.77%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACR 565
            +P GVV  I+PWNYP +++   +  A+AAGN +V+KPSE+ P ++  LA L  +      + V+ G       +L   +K   +  TG+      ++   A  +    +ELGGK+PV+     +L  A +
Sbjct:  137 DPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLTALKLAALAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSISTGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAAAQ 266          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ABDH_SALCH (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella choleraesuis GN=ydcW PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 40/130 (30.77%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACR 565
            +P GVV  I+PWNYP +++   +  A+AAGN +V+KPSE+ P ++  LA L  +      + V+ G       +L   +K   +  TG+      ++   A  +    +ELGGK+PV+     +L  A +
Sbjct:  137 DPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLTALKLAALAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAAAQ 266          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
BETB_BURP17.861e-1240.65Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP07.861e-1240.65Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURMS7.861e-1240.65Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA7.861e-1240.65Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM97.861e-1240.65Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM77.861e-1240.65Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
ASTD_SHEPW7.861e-1227.40N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
AL8A1_BOVIN7.861e-1228.48Aldehyde dehydrogenase family 8 member A1 OS=Bos t... [more]
ABDH_SALPC7.861e-1230.77Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]
ABDH_SALCH7.861e-1230.77Gamma-aminobutyraldehyde dehydrogenase OS=Salmonel... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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