FC869235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ABDH_SALPA (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella paratyphi A GN=ydcW PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQAC 610 +P GVV I+PWNYP +++ + A+AAGN +V+KPSE+ P ++ LA L + + V+ G +L +K + TG+ ++ A + +ELGGK+PV VFD VA G + N GQ C Sbjct: 137 DPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLTALKLAALAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFY--NAGQDC 280
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ROCA_BACP2 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=rocA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 48/156 (30.77%), Postives = 73/156 (46.79%), Query Frame = 2 Query: 170 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA-SSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 + V P GV L+I PWN+ F + V I GN +VLKP+ P ++ + +L + + V G+ AE L K I +TG+ V + AAK HL V+ E+GGK VV D ++++A + +G +GQ C Sbjct: 166 QYVYTPTGVTLVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASATPVIAARFVEELEQAGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQQHLKRVIAEMGGKDTVVVDEDADVELAANAIFTSAFGF-SGQKC 320
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ROCA2_BACSU (1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus subtilis GN=ycgN PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 47/156 (30.13%), Postives = 74/156 (47.44%), Query Frame = 2 Query: 170 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 + V P GV ++I PWN+ F + V I GN +VLKP+ P ++ +++ E + + V G+ AE L K I +TG+ V + AAK HL V+ E+GGK VV D ++++A + + +G GQ C Sbjct: 166 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASATPVIAAKFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQQHLKRVIAEMGGKDTVVVDEDADIELAAQSIFTSAFGF-AGQKC 320
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTU (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis GN=gabD1 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--GEYMD--LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643 +P GV+L + PWN+P ++ A+ AGN +LK + P + LA ++ G + D ++ V GAV + L D + TG+ + V A A + P +LELGG P + +L A + G+ NNGQ+CI+ I D Sbjct: 122 QPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSGAV--EAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQ-NNGQSCIAAKRFIVHAD 276
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: GABD1_MYCTA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gabD1 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--GEYMD--LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643 +P GV+L + PWN+P ++ A+ AGN +LK + P + LA ++ G + D ++ V GAV + L D + TG+ + V A A + P +LELGG P + +L A + G+ NNGQ+CI+ I D Sbjct: 122 QPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSGAV--EAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQ-NNGQSCIAAKRFIVHAD 276
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBP (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gabD1 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--GEYMD--LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643 +P GV+L + PWN+P ++ A+ AGN +LK + P + LA ++ G + D ++ V GAV + L D + TG+ + V A A + P +LELGG P + +L A + G+ NNGQ+CI+ I D Sbjct: 122 QPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSGAV--EAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQ-NNGQSCIAAKRFIVHAD 276
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: GABD1_MYCBO (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium bovis GN=gabD1 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV--GEYMD--LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643 +P GV+L + PWN+P ++ A+ AGN +LK + P + LA ++ G + D ++ V GAV + L D + TG+ + V A A + P +LELGG P + +L A + G+ NNGQ+CI+ I D Sbjct: 122 QPLGVILAVMPWNFPLWQAVRFAAPALMAGNVGLLKHASNVPQCALYLADVIARGGFPDGCFQTLLVSSGAV--EAILRDPRVAAATLTGSEPAGQSVGAIAGNEIKPTVLELGGSDPFIVMPSADLDAAVSTAVTGRVQ-NNGQSCIAAKRFIVHAD 276
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 44/152 (28.95%), Postives = 77/152 (50.66%), Query Frame = 2 Query: 185 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP-SEVAPASSSLLAKLVGEYMDLSSIRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631 P GVV +ISPWN+P + + + A+ GN +V+KP +E A + ++A + I +V G+V + + +TG+++V +I+ AA LE+GGK+PV+ +L+ A +I G + + GQ C + +I Sbjct: 146 PLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIKPATETAVTCAKIIACFEEAGLPAGVINLVTGPGSVVGQGLAEHDGVNAVTFTGSNQVGKIIGQAALARGAKYQLEMGGKNPVIVADDADLEAAAEAVITGAFR-STGQKCTATSRVI 296
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL8A1_HUMAN (Aldehyde dehydrogenase family 8 member A1 OS=Homo sapiens GN=ALDH8A1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 56/221 (25.34%), Postives = 97/221 (43.89%), Query Frame = 2 Query: 2 DIVDALLQDLDKPELESSIYEVALLKT-SIKSALKELKHWMTPEKAKTSITT----FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 D+++ L++ + E + +AL +T I +++ + + + TS T V P GV +ISPWN P L + A+AAGN ++ KPSE+ ++ +L KL+ + + + +V G L + I +TG+ A + +A H + LELGGK+P + NL + + N G+ C+ I K Sbjct: 78 DLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLGCMHYTVRAPVGVAGLISPWNLPLYLLTWKIAPAMAAGNTVIAKPSELTSVTAWMLCKLLDKAGVPPGVVNIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDANLDECIPATVRSSF-ANQGEICLCTSRIFVQK 297
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ABDH_SALTY (Gamma-aminobutyraldehyde dehydrogenase OS=Salmonella typhimurium GN=ydcW PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQAC 610 +P GVV I+PWNYP +++ + A+AAGN +V+KPSE+ P ++ LA L + + V+ G +L +K + TG+ ++ A + +ELGGK+PV VFD VA G + N GQ C Sbjct: 137 DPIGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLTALKLAVLAKDIFPPGVLNVLFGRGQTVGDVLTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHMELGGKAPVIVFDDADLDAVAQGVRTFGFY--NAGQDC 280 The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bpback to top |