FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.304e-18
Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 2
Query:  176 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 532
            +PEP GVV  I PWN+P L++   +  A+AAG  +VLKP+E  P S   L +++G+ +    I VV G  +E    L   Q+ DK+ +TG++ +   ++  AA +L P  +ELGGKSP ++
Sbjct:  151 LPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIGDLIPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAADNLIPSTIELGGKSPNIY 271          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  128 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            +K   S+        I+ EP GVV +I+PWNYP L+++  V  ++AAG   +LKPSE+A  +   LA +  E  +    + ++ G   E  A L      DKI +TG++     +M +AAK + PV LELGGKSP++    +++  A    + G +   NGQ C +   ++  +  A
Sbjct:  132 QKTPLSLPMDTFKGYILKEPIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLTCLELADICREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKLVKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCF-WTNGQICSATSRLLVHERIA 307          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_STRCO (Probable aldehyde dehydrogenase OS=Streptomyces coelicolor GN=SCO1174 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 532
            EP GVV  I PWN+P L++   +  A+AAGNA+VLKP+E  PAS      LV + +    + VV G   E    L    +  K+ +TG +   R++M  A++++ PV LELGGKSP +F
Sbjct:  154 EPLGVVAQIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHYWLSLVADLLPPGVLNVVNGFGVEAGKPLASSPRVAKVAFTGETTTGRLIMQYASENIKPVTLELGGKSPNIF 272          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 56/157 (35.67%), Postives = 84/157 (53.50%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            EP GVV  I PWN+P L+++  +  A+A G  +VLKP+E  P S+  LA+L+ +       I ++ G   +    L   +  DKI +TG++ + + +M+ AAK +  V LELGGKSP +     NLK A    + G    N GQ C +   +   KD
Sbjct:  156 EPVGVVGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLSALYLAELIDQAGFPAGVINIIPGFGEDAGEALTNHEAVDKIAFTGSTEIGKKIMSTAAKSIKRVTLELGGKSPNILLPDANLKKAIPGALNGVM-FNQGQVCCAGSRVFIHKD 311          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 532
            EP GVV  I PWN+P L++   +  A+AAGN +VLKP+ + P S  LL ++VG+ +    + VV GA       L   ++  K+ +TG++ V + +M  A +++ PV LELGGKSP +F
Sbjct:  159 EPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIF 277          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BADH_HORVU (Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 57/163 (34.97%), Postives = 90/163 (55.21%), Query Frame = 2
Query:  173 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV-FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            ++ EP GVV +I+PWNYP L++   V  A+AAG   VLKPSE+A  +   L  +  E  +    + ++ G   +  A +      DKI +TG++   + +M AAA+ + PV LELGGKSP+V FD   ++  A    ++G +  N GQ C +   ++  +  A
Sbjct:  148 VLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGAICEEIGLPSGVLNIITGLGPDAGAPIASHPHVDKIAFTGSTATGKTIMTAAAQMVKPVSLELGGKSPLVTFDDVADIDKAVEWPMLGCF-FNGGQVCSATSRLLLHEKIA 309          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 628
            EP GVV  I PWN+P L+    +  A+A GN +VLKPSE  P S+  +  L+ E       + VV G  + T   +    K DK+ +TG++ V R VM AAAK +L  V LELGGKSPVV     +L+ +      G +  N+GQAC +   I
Sbjct:  158 EPIGVVGQIIPWNFPLLMLAWKIGPALATGNCIVLKPSEFTPLSALRMCALIQEAGFPPGVVNVVTGYGSTTGQAISSHMKIDKVAFTGSTLVGRKVMEAAAKSNLKNVTLELGGKSPVVIFDDADLEQSVNWTAHGLF-WNHGQACCAGTRI 309          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 56/177 (31.64%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  128 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            ++A  S+      + ++ EP GVV +I+PWNYP L++   V  A+AAG   VLKPSE+A  +   L  +  E  +    + ++ G   E  A L      DKI +TG++   + +M  A++ + PV LELGGKSP++    +++  A    + G +  N GQ C +   ++  +  A
Sbjct:  134 QRAPISLPMENFESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIMITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCF-ANAGQVCSATSRLLLHEKIA 309          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 55/177 (31.07%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  128 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            +KA  ++      + ++ +P GVV +I+PWNYP L++   +  A+AAG   VLKPSE+A  +     ++  E  +    + +V G   +  A L      DK+ +TG+S     VMA+AA+ + PV LELGGKSP++    +++       + G +   NGQ C +   ++  +  A
Sbjct:  132 QKAPVTLPMERFKSHVLRQPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASITCLEFGEVCNEVGLPPGVLNIVTGLGPDAGAPLAAHPDVDKVAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIIVFEDVDIDQVVEWTMFGCF-WTNGQICSATSRLLVHESIA 307          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL9A1_ORYLA (Aldehyde dehydrogenase family 9 member A1 OS=Oryzias latipes GN=aldh9A1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAP 652
            EP GV + I  WNYPF ++      A+A GNA+V KPS   P ++ +LA++  E      +  V    AET +LL    K  K+ +TG+    + VM  +AK +  V LELGGKSP++     +L+ A +  +M  +    GQ C +   +   KD  P
Sbjct:  156 EPLGVCVGIGAWNYPFQIAACKSAPALACGNAMVFKPSPFTPVTAVILAEIYKEAGVPDGLFCVVQGGAETGSLLCNHPKVAKVSFTGSVPTGKKVMEMSAKGVKQVTLELGGKSPLIIFKDCDLENAVKGALMANF-LTQGQVCCNGTRVFVHKDILP 313          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
ALDH_VIBC34.304e-1838.84Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
BADH2_ARATH7.341e-1832.77Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
ALDH_STRCO7.341e-1841.18Probable aldehyde dehydrogenase OS=Streptomyces co... [more]
ALDH4_BACSU7.341e-1835.67Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
ALDB_ECOLI9.587e-1840.34Aldehyde dehydrogenase B OS=Escherichia coli (stra... [more]
BADH_HORVU1.252e-1734.97Betaine aldehyde dehydrogenase OS=Hordeum vulgare ... [more]
ALDH_AGABI1.252e-1740.52Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
BADH_ORYSJ1.635e-1731.64Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]
BADH_BETVU1.635e-1731.07Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
AL9A1_ORYLA2.789e-1734.59Aldehyde dehydrogenase family 9 member A1 OS=Oryzi... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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