FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BADH_SCHPO (Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe GN=meu8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 56/160 (35.00%), Postives = 91/160 (56.88%), Query Frame = 2 
Query:  185 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            P GV+ +I+PWN+P  ++L  +V AIA+GN +VLKPSE+AP S    +L+ K  G  +    + V+ G+  E+ A L    K   + +TG+    + +M AAA+++ P+ LELGGKSP++     +L +A        +  N G+AC +   +I  +  A
Sbjct:  162 PRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAG--LPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKIMHAAAENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIF-FNQGEACTAASRLIVHESVA 318
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAW (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MW2) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAS (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MSSA476) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAN (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain N315) GN=aldA PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAM (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=aldA PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAC (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain COL) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAB (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAA8 (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain NCTC 8325) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAA3 (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain USA300) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
[Close]
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDA_STAAR (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MRSA252) GN=aldA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPNGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLL 297
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
BADH_SCHPO3.643e-1735.00Probable betaine aldehyde dehydrogenase OS=Schizos... [more]
ALDA_STAAW3.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAS3.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAN3.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAM3.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAC3.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAB3.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAA83.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAA33.643e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAR4.758e-1735.53Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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