FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDHY_YEAST (Aldehyde dehydrogenase 2, mitochondrial OS=Saccharomyces cerevisiae GN=ALD2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE--GAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 628
            EP GV   I PWN P L+ +  +  A+AAGN +VLKP E+ P ++  +A L+ E       + VV   G  A  + L  +  DK+ +TG++ V ++VM AAAK +L  V LELGGKSP++     +L  A      G +  N GQ CI+   I
Sbjct:  186 EPVGVCGEIIPWNIPLLMYIWKIGPALAAGNTVVLKPEELTPLTALTVATLIKEAGFPPGVVNVVSGYGPTAGAACLSHKDNDKLAFTGSTLVGKVVMKAAAKSNLKKVTLELGGKSPMIVFIDADLDWAVENAHFGVF-FNQGQCCIAQSRI 337          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL9A1_HUMAN (4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens GN=ALDH9A1 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            EP GV + I  WNYPF ++      A+A GNA+V KPS   P S+ LLA++  E  +      VV+G  A T   L Q  D  K+ +TG+      +M  +AK + PV LELGGKSP++  S  ++  A +  +M  +    GQ C +   +   K+
Sbjct:  145 EPLGVCVGIGAWNYPFQIASWKSAPALACGNAMVFKPSPFTPVSALLLAEIYSEAGVPPGLFNVVQGGAA-TGQFLCQHPDVAKVSFTGSVPTGMKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMNNAVKGALMANF-LTQGQVCCNGTRVFVQKE 299          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BADH_GADCA (Betaine aldehyde dehydrogenase OS=Gadus callarias GN=aldh9A1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAP 652
            EP GV   I  WNYPF+++      A+A GNA+V KPS + P +  +LA++  E  + +  + VV+G  AET +LL       K+ +TG+    + VM  +AK +  V LELGGKSP++      L+ A R  +M  +    GQ C +   +   ++  P
Sbjct:  154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMP 311          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            EP GV + I  WNYPF ++      A+A GNA+V KPS   P S  LLA++  E  +      VV+G  A T   L Q  D  K+ +TG+      +M  +AK + PV LELGGKSP++  S  ++K A +  +M  +    G+ C +   +   K+
Sbjct:  145 EPLGVCVGIGAWNYPFQIACWKSAPALACGNAMVFKPSPFTPVSVLLLAEIYTEAGVPPGLFNVVQGGAA-TGQFLCQHRDVAKVSFTGSVPTGSKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMKNAVKGALMANF-LTQGEVCCNGTRVFVQKE 299          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: MSC7_YEAST (Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae GN=MSC7 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 66/222 (29.73%), Postives = 105/222 (47.30%), Query Frame = 2
Query:   23 QDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPS---SAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS-----------IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            +D  K  L++S+ E+ +    I+  +K  +  + P +       F      AEI  EP GV+  I  WNYPF   L P++ A+  GNA+V+K SE    SS    +L+ + ++              +   E   +         +  I + G+  VA  ++  AAK LTPV++ELGGK   +V DS  NL  A   +IM     ++GQ CI  + +I +K+
Sbjct:  180 RDSGKTMLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFMKWYKGAEIRYEPLGVISSIVSWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVELIRKCLEACDEDPDLVQLCYCLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAAKSLTPVVVELGGKDAFIVLDSAKNLD-ALSSIIMRGTFQSSGQNCIGIERVIVSKE 400          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL9A1_PONAB (4-trimethylaminobutyraldehyde dehydrogenase OS=Pongo abelii GN=ALDH9A1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643
            EP GV + I  WNYPF ++      A+A GNA+V KPS   P S+ LLA++  E  +      VV+G  A T   L Q  D  K+ +TG+      +M  +AK + PV LELGGKSP++  S  ++  A +  +M  +    GQ C +   +   K+
Sbjct:  145 EPLGVCVGIGAWNYPFQITSWKSAPALACGNAMVFKPSPFTPVSALLLAEIYTEAGVPPGLFNVVQGGAA-TGQFLCQHPDVAKVSFTGSVPTGMKIMEMSAKGIKPVTLELGGKSPLIIFSDCDMNNAVKGALMANF-LTQGQVCCNGTRVFVQKE 299          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 66/223 (29.60%), Postives = 106/223 (47.53%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVM-AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKD 643
            D ++  L+ L   E   +   + L +  +++A    ++   W   +  +T  T     A    EP GV   I PWN+PFL+    +  A+A GN ++LK +E+ P S+  L K V E       I V+ G        +      DK+ +TG++ V R+VM AAA+ +L  V LELGGKSP +  +  +L  A    +   +G   N+GQ C +   +   +D
Sbjct:   96 DCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGGWADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAA---VWTNYGIFYNSGQVCCAGSRVYVQED 315          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     NL  A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTAFKLAEIYSEAGLPAGVFNVVQGAGREIGQWLTEHAVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDANLDRAADIAVMANF-FSSGQVC 286          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649
            EP GV + I  WNYPF ++      A+A GNA++ KPS   P S+ LLA++  +         VV+G  A    L   ++  KI +TG+      +M  +AK + P+ LELGGKSP++  S  N++ A +  +M  +    GQ C +   +   K+ A
Sbjct:  145 EPLGVCVGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPVSALLLAEIYTKAGAPPGLFNVVQGGAATGQFLCHHREVAKISFTGSVPTGVKIMEMSAKGVKPITLELGGKSPLIIFSDCNMENAVKGALMANF-LTQGQVCCNGTRVFVQKEIA 301          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16
Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL---VGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++    G    + ++   +GA   T+     + +KI +TG +   R VMA A++  L  V +ELGGKSP++  +  +L VA    +M  +  ++GQ C +   +   +
Sbjct:  141 EPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDVAADIAMMANF-YSSGQVCTNGTRVFVPR 296          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
ALDHY_YEAST6.214e-1738.56Aldehyde dehydrogenase 2, mitochondrial OS=Sacchar... [more]
AL9A1_HUMAN6.214e-1735.674-trimethylaminobutyraldehyde dehydrogenase OS=Hom... [more]
BADH_GADCA8.116e-1734.38Betaine aldehyde dehydrogenase OS=Gadus callarias ... [more]
AL9A1_BOVIN8.116e-1735.674-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
MSC7_YEAST1.060e-1629.73Putative aldehyde dehydrogenase-like protein YHR03... [more]
AL9A1_PONAB1.060e-1635.674-trimethylaminobutyraldehyde dehydrogenase OS=Pon... [more]
YF19_SCHPO1.808e-1629.60Putative aldehyde dehydrogenase-like protein C9E9.... [more]
BETB_ACIAD1.808e-1638.78Betaine aldehyde dehydrogenase OS=Acinetobacter sp... [more]
AL9A1_MOUSE2.361e-1633.544-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]
BETB_XANAC5.261e-1634.39Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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