FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P S+  LA++  E  +      V+ G+ A   AL+ +  +  K+ +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLSALRLAEIFSEAGLPDGVFNVLTGSGAGVGALITEHPRIAKVSFTGGVATGKKVMASAAGSSLKDVTMELGGKSPLIVCEDADLDRAADIAVMANF-FSSGQVC 286          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_RHOS5 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=betB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  176 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            + EP G+ + I  WNYP  ++      A+A GNA+V KPSEV P  +  LA+++ E  +      VV+G  A  +AL+ D +  K+  TG+    R V AAAA+ +  V +ELGGKSP++     +L+ A    ++G +  ++GQ C +   +   K
Sbjct:  138 IREPLGLCVGIGAWNYPSQIACWKAAPALALGNAMVFKPSEVTPLGALKLAEILIEAGLPPGLFNVVQGRGAVGAALVSDSRVAKVSLTGSVPTGRRVYAAAAEGVRHVTMELGGKSPLIVFDDADLESAIGAAMLGNF-YSSGQICSNGTRVFVQK 293          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSE  P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   K
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANF-FSSGQVCTNGTRVFVPK 296          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSE  P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   K
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANF-FSSGQVCTNGTRVFVPK 296          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSE  P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   K
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANF-FSSGQVCTNGTRVFVPK 296          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSE  P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   K
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANF-FSSGQVCTNGTRVFVPK 296          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSE  P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   K
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANF-FSSGQVCTNGTRVFVPK 296          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSE  P ++  LA++  E  +      VV+GA  E    L +    +KI +TG     + VMA+AA   L  V +ELGGKSP++     +L  A    +M  +  ++GQ C +   +   K
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANF-FSSGQVCTNGTRVFVPK 296          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: FEAB_ECOLI (Phenylacetaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=feaB PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 53/152 (34.87%), Postives = 80/152 (52.63%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 628
            EP GVV  I PWN+P ++ +  V+ A+AAG ++V+KPSE  P +   +A+L  E  +      VV G+ A   A L       KI +TG++   + +   AA HLT V LELGGK+P +     + +     ++ G +  N GQ C +   I
Sbjct:  162 EPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSF-LNQGQVCAASSRI 312          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15
Identity = 56/147 (38.10%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610
            EP GVV  I  WNYP  ++L     A+AAGNA++ KPSEV P ++  LA++  E  +      V+ G  AET   L +     KI +TG     + VMA +AA  L  V +ELGGKSP++     +L +A    +M  +  ++GQ C
Sbjct:  141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGIGAETGQYLTEHPGIAKISFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIIADDADLDLAADIAMMANF-YSSGQVC 286          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
BETB_PSEU51.172e-1537.41Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
BETB_RHOS51.999e-1534.39Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_ACIBY1.999e-1535.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT1.999e-1535.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS1.999e-1535.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC1.999e-1535.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB51.999e-1535.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB31.999e-1535.67Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
FEAB_ECOLI2.611e-1534.87Phenylacetaldehyde dehydrogenase OS=Escherichia co... [more]
BETB_KLEP32.611e-1538.10Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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