FC869235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L++A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLELAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 51/156 (32.69%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 173 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAE--TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 631 ++ +P GVV I+PWN+P + V A+A+G +V+KPSE+ P ++ A+L + + ++ VV G E + L + KI +TG++ V + +MAAAA + V LELGG +P + +L VA + + K+ N+GQ C+ + ++ Sbjct: 184 VLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFR-NSGQTCVCANRVL 338
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: GABD2_MYCS2 (Putative succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium smegmatis GN=gabD2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 51/156 (32.69%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 185 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFA 649 P GVV +ISPWNYP LS+ + A+ AGNA+V+KP P + A+L+ E + VV G + + + D + +TG++ R + + L ELGGK+P++ G L VA + + N GQ CIS + I + A Sbjct: 147 PKGVVGVISPWNYPMALSISDSIPALLAGNAVVVKPDSQTPYCTLANAELLYEAGLPRDLFAVVPGPGSVVGTAIVENCDYLMFTGSTATGRTLAEQCGRRLIGFSAELGGKNPMIVTRGAKLDVAAKAATRACFS-NAGQLCISIERIYVERAVA 301
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G A L + + +KI +TG + R VMA A++ L V +ELGGKSP++ + +L +A +M + ++GQ C + + + Sbjct: 141 EPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANF-YSSGQVCTNGTRVFVPR 296
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G A L + + +KI +TG + R VMA A++ L V +ELGGKSP++ + +L +A +M + ++GQ C + + + Sbjct: 141 EPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANF-YSSGQVCTNGTRVFVPR 296
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G A L + + +KI +TG + R VMA A++ L V +ELGGKSP++ + +L +A +M + ++GQ C + + + Sbjct: 141 EPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAADIAMMANF-YSSGQVCTNGTRVFVPR 296
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 610 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPNGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVC 286
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI-ITTK 640 EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E + V+ G AET L + K+ +TG + VMA +AA L V +ELGGKSP++ +L +A +M + ++GQ C + + I TK Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANF-FSSGQVCTNGTRVFIPTK 297
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 66/182 (36.26%), Postives = 92/182 (50.55%), Query Frame = 2 Query: 116 WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVM-AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 643 W + K T S I EP GV I PWN+P L+ + AIA GN +VLK +E P S+ + KL+ E I V+ G A A SA +D DKI +TG++ V R +M +AA +L V LELGGKSP + + +L A + G + N+GQAC + I ++ Sbjct: 131 WADKIEGKVVDTAPDSFNYIRKEPIGVCGQIIPWNFPILMWSWKIGPAIATGNTVVLKTAEQTPLSAYIACKLIQEAGFPPGVINVITGFGKIAGAAMSAHMD--IDKIAFTGSTVVGRQIMKSAAGSNLKKVTLELGGKSPNIVFADADLDEAIHWVNFGIY-FNHGQACCAGSRIYVQEE 309
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 182 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 640 EP GVV I WNYP +++ A+AAGNA+V KPSEV P ++ LA++ E + VV+G E L + +KI +TG + VMA AA+ L V +ELGGKSP+V +L A +M + ++GQ C + + + Sbjct: 141 EPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREIGQWLTEHPVIEKISFTGGVATGKKVMASAASSSLKEVTMELGGKSPLVICDDADLDRAADIAVMANF-FSSGQVCTNGTRVFVPR 296 The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bpback to top |