FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.143e-62
Identity = 103/162 (63.58%), Postives = 129/162 (79.63%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL++ WK+ PA+ CGNT+VLK+AEQTPL  L  A L  EAG PPGV+NV+SG+G  AGAAL+SHMDVDK++FTG    G+ + + AA SNLK VTLELGGKSP I+F+DAD+D A+   +F +F+N GQCCCAGSR YV E +YD+FV+K
Sbjct:  155 GVCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKTAEQTPLGGLVAASLVKEAGFPPGVINVISGFGKVAGAALSSHMDVDKVAFTGSTVVGRTILKAAASSNLKKVTLELGGKSPNIVFEDADIDNAISWVNFGIFFNHGQCCCAGSRVYVQESIYDKFVQK 316          

HSP 2 Score: 26.1794 bits (56), Expect = 1.143e-62
Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  542 QGPQIDPEQFEKVLKYIR 595
            QGPQ+   QF+++++YI+
Sbjct:  336 QGPQVSKVQFDRIMEYIQ 353          

HSP 3 Score: 24.2534 bits (51), Expect = 1.143e-62
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  480 RKSKARAMRRIVGDPF 527
            +K K RA + +VGDPF
Sbjct:  315 QKFKERAQKNVVGDPF 330          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH9_POLMI (Aldehyde dehydrogenase 9 (Fragment) OS=Polyandrocarpa misakiensis GN=ALDH9 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.332e-62
Identity = 104/153 (67.97%), Postives = 125/153 (81.70%), Query Frame = 1
Query:   31 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            FPLL+  WK+ PAL CGNT+V+K+AEQTPLTALYVA L  EAG PPGV+N++SGYGPTAGAA++ HMDVDK++FTG  +T  IV E AAKSNLK V+LELGGKSP I+  D+D+D AV+  H  LF+N GQCCCAGSR YV E VYDEFV+K+
Sbjct:    1 FPLLMQAWKLGPALACGNTVVMKTAEQTPLTALYVAALAKEAGFPPGVINIISGYGPTAGAAISEHMDVDKVAFTGSTETAHIVMEAAAKSNLKRVSLELGGKSPMIVLADSDLDFAVDTCHHGLFFNMGQCCCAGSRIYVQEGVYDEFVKKS 153          

HSP 2 Score: 32.3426 bits (72), Expect = 3.332e-62
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  533 GVEQGPQIDPEQFEKVLKYI 592
            G+EQGPQID EQF K+ + I
Sbjct:  169 GIEQGPQIDTEQFNKINRMI 188          

HSP 3 Score: 24.2534 bits (51), Expect = 3.332e-62
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  480 RKSKARAMRRIVGDPF 527
            +KS  RA +R VGDPF
Sbjct:  151 KKSVERAKKRTVGDPF 166          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.033e-61
Identity = 104/162 (64.20%), Postives = 133/162 (82.10%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+++WK+ PA+  GNT+VLK+AEQTPL+ALY AKL  EAG P GV+NV+SG+G TAGAA++SHMD+DK++FTG    G+ + + AAKSNLK VTLELGGKSP I+FDDAD+D A+  A+F +F+N GQCCCAGSR  V E +YD+FV +
Sbjct:  156 GVCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSALYAAKLIKEAGFPAGVINVISGFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFDDADIDNAISWANFGIFFNHGQCCCAGSRILVQEGIYDKFVAR 317          

HSP 2 Score: 25.409 bits (54), Expect = 1.033e-61
Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  542 QGPQIDPEQFEKVLKYI 592
            QGPQ+   QF+++++YI
Sbjct:  337 QGPQVSQLQFDRIMEYI 353          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.466e-60
Identity = 102/163 (62.58%), Postives = 129/163 (79.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTALY+A L  E G PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGGK+P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++
Sbjct:  172 GVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRS 334          

HSP 2 Score: 30.4166 bits (67), Expect = 1.466e-60
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  539 EQGPQIDPEQFEKVLKYI 592
            EQGPQID +QF+K+L+ I
Sbjct:  352 EQGPQIDQKQFDKILELI 369          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 1.911e-60
Identity = 102/163 (62.58%), Postives = 129/163 (79.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTALY+  L  EAG PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGGK+P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++
Sbjct:  172 GVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTALYLGSLIKEAGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVRRS 334          

HSP 2 Score: 30.4166 bits (67), Expect = 1.911e-60
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  539 EQGPQIDPEQFEKVLKYI 592
            EQGPQID +QF+K+L+ I
Sbjct:  352 EQGPQIDQKQFDKILELI 369          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 3.249e-60
Identity = 101/163 (61.96%), Postives = 129/163 (79.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV G I PWNFPLL+  WK+APAL CGNT+VLK AEQTPLTALY+A L  E G PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGG++P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++
Sbjct:  172 GVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRS 334          

HSP 2 Score: 30.4166 bits (67), Expect = 3.249e-60
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  539 EQGPQIDPEQFEKVLKYI 592
            EQGPQID +QF+K+L+ I
Sbjct:  352 EQGPQIDQKQFDKILELI 369          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDHY_YEAST (Aldehyde dehydrogenase 2, mitochondrial OS=Saccharomyces cerevisiae GN=ALD2 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.603e-59
Identity = 110/162 (67.90%), Postives = 126/162 (77.78%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G+I+PWN PLL++ WK+ PAL  GNT+VLK  E TPLTAL VA L  EAG PPGV+NVVSGYGPTAGAA  SH D DKL+FTG    GK+V + AAKSNLK VTLELGGKSP I+F DAD+D AVE AHF +F+NQGQCC A SR  VHE +YDE VE+
Sbjct:  189 GVCGEIIPWNIPLLMYIWKIGPALAAGNTVVLKPEELTPLTALTVATLIKEAGFPPGVVNVVSGYGPTAGAACLSHKDNDKLAFTGSTLVGKVVMKAAAKSNLKKVTLELGGKSPMIVFIDADLDWAVENAHFGVFFNQGQCCIAQSRITVHESIYDEIVER 350          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.333e-58
Identity = 96/164 (58.54%), Postives = 130/164 (79.27%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV GQI+PWNFPLL++ WK+ PA+  GNT+V+K+AEQTPL+ LY A +  EAG+P GV+NV+SG+G  AG+A++ HMD+DK++FTG    G+ + + AAKSNLK VTLELGGKSP I+F+DAD+D A+  A+F +FYN GQCCCAGSR  V E +YD+F+ + +
Sbjct:  157 GVCGQIIPWNFPLLMWAWKIGPAIATGNTVVIKTAEQTPLSGLYAANVIKEAGIPAGVVNVISGFGRVAGSAISHHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFNDADIDNAISWANFGIFYNHGQCCCAGSRILVQEGIYDKFIARLK 320          

HSP 2 Score: 25.7942 bits (55), Expect = 1.333e-58
Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  542 QGPQIDPEQFEKVLKYIR 595
            QGPQ+   QF+++++YI+
Sbjct:  338 QGPQVSQLQFDRIMEYIQ 355          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.357e-58
Identity = 104/163 (63.80%), Postives = 130/163 (79.75%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI PWN P++L   K+ PAL CGNT+++K AEQTPLTAL+VA L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++QE AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +YDEFV+++
Sbjct:  161 GVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEETIYDEFVQRS 323          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.793e-58
Identity = 103/163 (63.19%), Postives = 129/163 (79.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV G I PWN P++L   K+ PAL CGNT+++K AEQTPLTAL+VA L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++QE AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +YDEFV+++
Sbjct:  161 GVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRS 323          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_CLAHE1.143e-6263.58Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
ALDH9_POLMI3.332e-6267.97Aldehyde dehydrogenase 9 (Fragment) OS=Polyandroca... [more]
ALDH_EMENI1.033e-6164.20Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
AL1A3_MOUSE1.466e-6062.58Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
AL1A3_HUMAN1.911e-6062.58Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
AL1A3_RAT3.249e-6061.96Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
ALDHY_YEAST1.603e-5967.90Aldehyde dehydrogenase 2, mitochondrial OS=Sacchar... [more]
ALDH_ASPNG1.333e-5858.54Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH1_MACPR1.357e-5863.80Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
ALDH1_ELEED8.793e-5863.19Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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