FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:1..598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA1_BACHK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis subsp. konkukian GN=iolA1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV   I P+NFP+++  W    A+ CGNT VLK++E+TPL A  + +LF+EAG P GVLN+V G G     ++  + D+  +SF G     + V E   K   K V    G K+  I+  D ++++ V+    + F + G+ C A S   V + + DEF++
Sbjct:  146 GVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTSERTPLLAERLVELFYEAGFPKGVLNLVQG-GKDVVNSILENKDIQAVSFVGSEPVARYVYETGTKHG-KRVQALAGAKNHAIVMPDCNLEKTVQGVIGSAFASSGERCMACSVVAVVDEIADEFID 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA1_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus cereus (strain ZK / E33L) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV   I P+NFP+++  W    A+ CGNT VLK++E+TPL A  + +LF+EAG P GVLN+V G G     ++  + D+  +SF G     + V E   K   K V    G K+  I+  D ++++ V+    + F + G+ C A S   V + + DEF++
Sbjct:  146 GVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTSERTPLLAERLVELFYEAGFPKGVLNLVQG-GKDVVNSILENKDIQAVSFVGSEPVARYVYETGTKHG-KRVQALAGAKNHAIVMPDCNLEKTVQGVIGSAFASSGERCMACSVVAVVDEIADEFID 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA1_BACAN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus anthracis GN=iolA1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV   I P+NFP+++  W    A+ CGNT VLK++E+TPL A  + +LF+EAG P GVLN+V G G     ++  + D+  +SF G     + V E   K   K V    G K+  I+  D ++++ V+    + F + G+ C A S   V + + DEF++
Sbjct:  146 GVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTSERTPLLAERLVELFYEAGFPKGVLNLVQG-GKDVVNSILENKDIQAVSFVGSEPVARYVYETGTKHG-KRVQALAGAKNHAIVMPDCNLEKTVQGVIGSAFASSGERCMACSVVAVVDEIADEFID 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: IOLA1_BACAH (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis (strain Al Hakam) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 483
            GV   I P+NFP+++  W    A+ CGNT VLK++E+TPL A  + +LF+EAG P GVLN+V G G     ++  + D+  +SF G     + V E   K   K V    G K+  I+  D ++++ V+    + F + G+ C A S   V + + DEF++
Sbjct:  146 GVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTSERTPLLAERLVELFYEAGFPKGVLNLVQG-GKDVVNSILENKDIQAVSFVGSEPVARYVYETGTKHG-KRVQALAGAKNHAIVMPDCNLEKTVQGVIGSAFASSGERCMACSVVAVVDEIADEFID 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 62/162 (38.27%), Postives = 87/162 (53.70%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I P+N+P+ L   K+ PAL  GN++VLK   Q  + AL++   FH AG P G+++ V+G G   G  L  H  V+ +SFTG  DTG  + +   K+ + P+ +ELGGK   I+ +DAD+D          F   GQ C A     + E V D  VEK
Sbjct:  160 GVVLAIPPFNYPVNLAVSKIGPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISK---KAGMVPLQMELGGKDACIVLEDADLDLVAANIVKGGFSYSGQRCTAVKVVLIMEAVADTVVEK 317          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: GABD1_MYCUA (Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 61/162 (37.65%), Postives = 79/162 (48.77%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   ++PWNFPL       APAL  GN  +LK A   P +ALY+A +   AG P G    +     +A   +     V   + TG    G+ V  +A    +KP  LELGG  PFI+   AD+D+AV  A      N GQ C A  R   H  +YD FV+K
Sbjct:  126 GVVLAVMPWNFPLWQAGRFAAPALMAGNVGLLKHASNVPQSALYLADVIARAGFPDGCFQTLL-VSASAVEGILRDPRVAAATLTGSEPAGQSVGAIAG-DEIKPTVLELGGSDPFIVMPSADLDKAVSTAVTGRVQNNGQSCIAAKRFIAHADIYDAFVDK 285          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_YERPY (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=astD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT+V K +E TP TA    KL+ +AG+P GVLN+V G G   G ALA+  D+D L FTG   TG  +    A    K + LE+GG +  I+    D D  V LA  + F + GQ C    R  V
Sbjct:  150 GVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQQAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSAFISAGQRCTCSRRLLV 299          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_YERPG (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=astD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT+V K +E TP TA    KL+ +AG+P GVLN+V G G   G ALA+  D+D L FTG   TG  +    A    K + LE+GG +  I+    D D  V LA  + F + GQ C    R  V
Sbjct:  150 GVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQQAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSAFISAGQRCTCSRRLLV 299          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_YERPE (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pestis GN=astD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT+V K +E TP TA    KL+ +AG+P GVLN+V G G   G ALA+  D+D L FTG   TG  +    A    K + LE+GG +  I+    D D  V LA  + F + GQ C    R  V
Sbjct:  150 GVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQQAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSAFISAGQRCTCSRRLLV 299          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ASTD_YERPA (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=astD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 453
            GV     P+NFP  L    + PAL  GNT+V K +E TP TA    KL+ +AG+P GVLN+V G G   G ALA+  D+D L FTG   TG  +    A    K + LE+GG +  I+    D D  V LA  + F + GQ C    R  V
Sbjct:  150 GVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAEETVKLWQQAGIPDGVLNLVQG-GRETGEALAAQPDIDGLLFTGSAHTGYHLHRQLAGQPEKMLALEMGGNNALIVEQVKDRDAVVNLAIQSAFISAGQRCTCSRRLLV 299          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IOLA1_BACHK2.955e-2135.40Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACCZ2.955e-2135.40Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACAN2.955e-2135.40Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACAH2.955e-2135.40Methylmalonate semialdehyde dehydrogenase [acylati... [more]
GAPN_WHEAT2.955e-2138.27NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GABD1_MYCUA2.955e-2137.65Succinate-semialdehyde dehydrogenase [NADP+] 1 OS=... [more]
ASTD_YERPY2.955e-2141.06N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_YERPG2.955e-2141.06N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_YERPE2.955e-2141.06N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_YERPA2.955e-2141.06N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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