FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:1..598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.319e-50
Identity = 97/176 (55.11%), Postives = 126/176 (71.59%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK-ARHVQ*GVLLAIP 525
            GV GQIVPWN+PL +  WK+APAL  GN I++KSAE TPL+ LY A L  EAG P GV+N++SG G  AG+ +A H  +DK++FTG    G IVQ+LAA SNLK VTLE GGKSPF++F+DAD+DQAV+ A   + YN GQ C + SR YV + VYD+F+E   +HV    ++ +P
Sbjct:  156 GVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAA-SNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMP 330          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.713e-49
Identity = 90/162 (55.56%), Postives = 114/162 (70.37%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV  QIVPWN+PL +  WK+  AL  GNT+++K AE T L+ LY A L  +AG PPGV+N+V GYG   G ALASHMD+DK+SFTG    G  V E + +SNLK VTLE GGKSP ++F+DAD+D+A++     +FYN GQ C A SR YV   +YD+FVEK
Sbjct:  160 GVVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDVTLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEK 321          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 1.662e-48
Identity = 88/164 (53.66%), Postives = 123/164 (75.00%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV GQI+PWNFPLL+++WK+ PAL  GNT+VLK AE TPL+AL+ ++L  EAG+P GV+N++ G G   G  L++H DV K++FTG   TG+ + ++AA   +K VTLELGGKSP I+F DAD+D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K +
Sbjct:  181 GVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAA-DTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLK 343          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.662e-48
Identity = 88/164 (53.66%), Postives = 123/164 (75.00%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            GV GQI+PWNFPLL+++WK+ PAL  GNT+VLK AE TPL+AL+ ++L  EAG+P GV+N++ G G   G  L++H DV K++FTG   TG+ + ++AA   +K VTLELGGKSP I+F DAD+D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K +
Sbjct:  181 GVCGQIIPWNFPLLMWSWKIGPALATGNTVVLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAA-DTVKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLK 343          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH3_YEAST (Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyces cerevisiae GN=ALD3 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.032e-46
Identity = 86/162 (53.09%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV  QIVPWN+PL +   K+  AL  GNT+++K AE T L+ LY A L  +AG PPGV+NV+ GYG   G AL +HMD+DK+SFTG    G  V E + +SNLK +TLE GGKSP ++F+DAD+D+A+E     +F+N GQ C A SR YV   +YD+FVEK
Sbjct:  160 GVVAQIVPWNYPLAMACRKMQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNVIPGYGSVVGKALGTHMDIDKISFTGSTKVGGSVLEASGQSNLKDITLECGGKSPALVFEDADLDKAIEWVANGIFFNSGQICTANSRVYVQSSIYDKFVEK 321          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.709e-46
Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+  WKVAP+L  G T +LK +E   LT L +A +  E GLPPGVLN+++G G  AGA LASH  VDK+ FTG   TG  +   AAK  +KPV+LELGGKSP I+FDD D+D+AVE   F  F+  GQ C A SR  VHER+ DEF++K
Sbjct:  153 GVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLTCLELADICREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKL-VKPVSLELGGKSPIIVFDDVDIDKAVEWTMFGCFWTNGQICSATSRLLVHERIADEFLDK 313          

HSP 2 Score: 23.8682 bits (50), Expect = 4.709e-46
Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  527 QSGVEQGPQIDPEQFEKVLKYI 592
            + G   GP +   Q+E+VLK++
Sbjct:  328 EEGCRLGPVVSKGQYERVLKFV 349          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.912e-46
Identity = 89/162 (54.94%), Postives = 118/162 (72.84%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV GQI+PWNFPLL+  WK+  AL  G TIVLK AEQTPL+ALY+A+L  +AG P GV+N++ G+G  AG AL +H  VDK++FTG  + GK +   AAKS +K VTLELGGKSP I+  DA++ +A+  A   + +NQGQ CCAGSR ++H+  YDE V++
Sbjct:  159 GVVGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLSALYLAELIDQAGFPAGVINIIPGFGEDAGEALTNHEAVDKIAFTGSTEIGKKIMSTAAKS-IKRVTLELGGKSPNILLPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDQYDEVVDE 319          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.832e-45
Identity = 89/162 (54.94%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+ TWK+APAL  G T VLK +E   +T L   ++ +E GLPPGVLN+V+G GP AGA LA+H DVDK++FTG   TG  V   AA+  +KPVTLELGGKSP I+F+D D+DQ VE   F  F+  GQ C A SR  VHE +  EF+++
Sbjct:  153 GVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASITCLEFGEVCNEVGLPPGVLNIVTGLGPDAGAPLAAHPDVDKVAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIIVFEDVDIDQVVEWTMFGCFWTNGQICSATSRLLVHESIAAEFIDR 313          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.107e-45
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+  WKVAP+L  G T +LK +E   +T L +A +  E GLPPGVLNV++G+G  AGA LASH  VDK++FTG   TG  V   AA+  +KPV++ELGGKSP I+FDD D+D+A E A F  F+  GQ C A SR  VHE +  EF+EK
Sbjct:  153 GVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVTCLELADICREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQL-VKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEK 313          

HSP 2 Score: 25.7942 bits (55), Expect = 5.107e-45
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  524 LQSGVEQGPQIDPEQFEKVLKYI 592
            ++ G   GP +   Q+EK+LK+I
Sbjct:  327 MEEGCRLGPVVSKGQYEKILKFI 349          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.902e-44
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G I PWN+PLL+ TWKVAPAL  G T VLK +E   LT L +  +  E GLPPGVLN+++G G  AGA LASH  VDK++FTG  +TGK +  + A   +KPV+LELGGKSP I+FDD D+D+AVE A F  F N GQ C A SR  +HE++   F+++
Sbjct:  155 GVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIM-ITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANAGQVCSATSRLLLHEKIAKRFLDR 315          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YLX7_SCHPO2.319e-5055.11Putative aldehyde dehydrogenase-like protein C922.... [more]
ALDH2_YEAST5.713e-4955.56Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
ALDH5_YEAST1.662e-4853.66Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAS71.662e-4853.66Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH3_YEAST2.032e-4653.09Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyce... [more]
BADH2_ARATH4.709e-4655.56Betaine aldehyde dehydrogenase 2, mitochondrial OS... [more]
ALDH4_BACSU5.912e-4654.94Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
BADH_BETVU3.832e-4554.94Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
BADH1_ARATH5.107e-4554.32Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
BADH_ORYSJ1.902e-4454.32Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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