FC869243

Overview
NameFC869243
Unique NameFC869243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:1..598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.570e-41
Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV G ++PWN+PL++  WK A  L  GNT+VLK A+ TPLTAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG    GK + +  A  N+K V+LELGGKSP IIF D D+D+AV +   ++F+N+G+ C A  R ++ E ++DEFV++
Sbjct:  565 GVCGIVIPWNYPLMMLAWKTAACLAAGNTVVLKPAQVTPLTALKFAELSVKAGIPKGVINILPGAGSLIGQRLSDHPDVRKIGFTGSTPIGKHIMKSCAVGNVKKVSLELGGKSPLIIFQDCDLDKAVRMGMSSVFFNKGENCIAAGRLFLEESIHDEFVKR 726          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.357e-41
Identity = 83/162 (51.23%), Postives = 109/162 (67.28%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN +V K +E TPLTAL +A+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V   + D F  K
Sbjct:  144 GVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVIANFFSSGQVCTNGTRVFVQRSIKDAFTAK 304          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: ALDH_RHORT (Aldehyde dehydrogenase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=Rru_A0931 PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.357e-41
Identity = 92/170 (54.12%), Postives = 119/170 (70.00%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD---AD---VDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 489
            GV GQI+PWNFP+L+ TWK+APAL  GN IVLK AEQTP++ L + +L  +  LPPGVLNVV+G+G  AG  LAS   + K++FTG   TG+++ + A++ NL PVTLELGGKSP + FDD   AD    D+AVE    FAL  NQG+ C   SR  +HE +YD F+E+A
Sbjct:  156 GVVGQIIPWNFPILMATWKLAPALAAGNCIVLKPAEQTPISILVLTELIADL-LPPGVLNVVNGFGLEAGKPLASSKRIAKIAFTGETATGRLIMQYASQ-NLIPVTLELGGKSPNVFFDDIASADDSFFDKAVEGFVMFAL--NQGEICTCPSRALIHESLYDRFIERA 321          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 83/164 (50.61%), Postives = 111/164 (67.68%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            G+   I  WN+P+ +  WK APAL  GN ++ K +E+TPLTAL +A+++ EAGLP GV NVV G     G  L +H D+ K+SFTG   TGK+V   +AK+ LK VT+ELGGKSP I+FDDA +D AV  A  A FY QG+ C  G+R +VHE +YD+FV + +
Sbjct:  141 GICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIYSEAGLPDGVFNVVQG-DYRVGQMLTAHPDIAKVSFTGESGTGKVVMGDSAKT-LKQVTMELGGKSPLIVFDDAKLDDAVSAAMVANFYTQGEVCTNGTRVFVHESIYDDFVAQLK 302          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.726e-41
Identity = 83/164 (50.61%), Postives = 111/164 (67.68%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            G+   I  WN+P+ +  WK APAL  GN ++ K +E+TPLTAL +A++F EAGLP GV NVV G     G  L +H D+ K+SFTG   TGK V   +AK+ LK VT+ELGGKSP IIFDDA +D AV  +  A FY QG+ C  G+R YVHE +Y++F+++ +
Sbjct:  141 GICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIFTEAGLPDGVFNVVQG-DYRVGQMLTAHPDIAKVSFTGETGTGKAVMSDSAKT-LKSVTMELGGKSPMIIFDDAKLDDAVSASMVANFYTQGEVCTNGTRVYVHESIYNDFIDQLK 302          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: DMPC_PSEUF (2-hydroxymuconic semialdehyde dehydrogenase OS=Pseudomonas sp. (strain CF600) GN=dmpC PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 82/178 (46.07%), Postives = 116/178 (65.17%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKARHVQ*GVLLAIPSE 531
            GV G I PWN PLLL TWKV PAL CGNT+V+K +E+TPLT   + ++   AG+P GV NVV G+GP +AGA L  H DV+ ++FTG   TG+ +   AAK  ++PV+ ELGGK+  I+F D D+D+A+E +  ++F N GQ C    R YV   ++DEFV + +     +++  P +
Sbjct:  146 GVIGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPLTTALLGEVMQAAGVPAGVYNVVHGFGPDSAGAFLTEHPDVNAITFTGETRTGEAIMRAAAK-GVRPVSFELGGKNAGIVFADCDLDKAIEGSMRSVFANGGQVCLGTERLYVERPIFDEFVARLKAGAESLVIGTPDD 322          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 84/164 (51.22%), Postives = 110/164 (67.07%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAR 492
            G+   I  WN+P+ +  WK APAL  GN ++ K +E+TPL+AL +A+LF +AG+P GV NVV G     G  L +H ++DK+SFTG   TGK V   +A + LKPVT+ELGGKSP IIFDDAD+D AV  A  A FY QG+ C  G+R YV   +YD FVE+ +
Sbjct:  141 GICAGIGAWNYPIQIAMWKAAPALAAGNAMIFKPSEETPLSALKLAELFTQAGVPDGVFNVVQG-DYRVGQMLTAHPEIDKVSFTGESGTGKKVMADSA-ATLKPVTMELGGKSPLIIFDDADLDDAVSAAMVANFYTQGEVCTHGTRVYVQRAMYDAFVEQLK 302          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 9.767e-41
Identity = 84/161 (52.17%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480
            GV   IVPWNFPLLL  WK+ PAL  GN+++LK +E++PL+A+ +A L  EAGLP GVLNVV+G+G  AG AL+ H D+D ++FTG   TGK + + A  SN+K V LE GGKS  I+F D  D+ QA       +FYNQGQ C AG+R  + E + DEF+
Sbjct:  159 GVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_VIBHB (Betaine aldehyde dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=betB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40
Identity = 83/160 (51.88%), Postives = 108/160 (67.50%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 480
            G+   I  WN+P+ +  WK APAL  GN ++ K +E+TPLTAL +A+++ EAGLP GV NV+ G     G  L +H D+ K+SFTG   TGK+V   +A + LK VT+ELGGKSP IIFDDA +D AV  A  A FY QG+ C  G+R +VHE +YDEFV
Sbjct:  141 GICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIYSEAGLPDGVFNVIQG-DYRVGQMLTAHPDIAKVSFTGESGTGKVVMGDSA-ATLKQVTMELGGKSPMIIFDDAKLDDAVSAAMVANFYTQGEVCTHGTRVFVHEGIYDEFV 298          
BLAST of FC869243 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40
Identity = 82/162 (50.62%), Postives = 113/162 (69.75%), Query Frame = 1
Query:    1 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 486
            GV   I  WN+P+ +  WK APAL  GN ++ K +E TPL+AL +A+++ EAG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+
Sbjct:  144 GVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVER 304          
The following BLAST results are available for this feature:
BLAST of FC869243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FTHFD_XENTR2.570e-4147.5310-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
BETB_BURVG3.357e-4151.23Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
ALDH_RHORT3.357e-4154.12Aldehyde dehydrogenase OS=Rhodospirillum rubrum (s... [more]
BETB_VIBPA4.384e-4150.61Betaine aldehyde dehydrogenase OS=Vibrio parahaemo... [more]
BETB_VIBSL5.726e-4150.61Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
DMPC_PSEUF7.479e-4146.072-hydroxymuconic semialdehyde dehydrogenase OS=Pse... [more]
BETB_VIBVU7.479e-4151.22Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
PUUC_ECOLI9.767e-4152.17Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
BETB_VIBHB1.276e-4051.88Betaine aldehyde dehydrogenase OS=Vibrio harveyi (... [more]
BETB_BURPS1.276e-4050.62Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionC31010B01EF AbioticL1 Citrus clementina cDNA clone C31010B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869243 ID=FC869243; Name=FC869243; organism=Citrus clementina; type=EST; length=596bp
GGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTCTTCTCTTGTTTAC
TTGGAAAGTAGCGCCTGCACTAACTTGTGGCAATACTATTGTTCTAAAGT
CTGCTGAGCAAACGCCTTTGACTGCTCTGTATGTGGCAAAGCTATTCCAT
GAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCC
AACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTT
TTACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAA
AGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTAT
AATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTG
CTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTAT
GTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAGGCACGTGCA
ATGAGGCGTATTGTTGGCGATCCCTTCAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAAGTACATAAGGT
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