FC869251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869251 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.005e-14 Identity = 46/122 (37.70%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 239 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGSTLNYFGKNIPINLVFAVIAEIVLVGGAE 604 PDR ++ P S PE+L G +PGD+G+DP GL P+ EL+H+RWAMLGAAG IPE K G P W+ G T F + E+VL+G AE Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WYTAGEQEYFTDTTTLF------------VIELVLIGWAE 165
BLAST of FC869251 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.262e-12 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 290 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 499 P+YLTG + GD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F K G PE W+ G Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WYDAG 131
BLAST of FC869251 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.265e-12 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 290 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG 499 P YLTG +PGD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F G P+ W+ G Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPK--WYAAG 130
BLAST of FC869251 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11 Identity = 37/109 (33.94%), Postives = 53/109 (48.62%), Query Frame = 2 Query: 290 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGSTLNYFGKNIPINLVFAVIA-EIVLVGGAEYYR 613 P YL G PGD+G+D GL + P + +Y+ ELIH RWAML G I+PEA N W + G Y G+ +P + ++A E + + E+ R Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGL--GNWVKAQEW-----AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157
BLAST of FC869251 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 46/112 (41.07%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 296 YLTGEVPGDYGYDPFGLSKKPDDFS----KYQAY-ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGSTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR 613 YL G +PGD+G+DP GLS K+ AY E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N + + E+ L+G AE+ R Sbjct: 65 YLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL-----FVLEMALMGFAEHRR 170 The following BLAST results are available for this feature:
BLAST of FC869251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869251 ID=FC869251; Name=FC869251; organism=Citrus clementina; type=EST; length=631bpback to top |