FC869252

Overview
NameFC869252
Unique NameFC869252
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL4_ARATH (Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.444e-13
Identity = 53/159 (33.33%), Postives = 75/159 (47.17%), Query Frame = 1
Query:   10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERV-------LSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGF---LDRKEREKTGEDLGLEIFKELHSRSFFQQSSND-----ASRFVMHDLINDL 441
            +EEI K+IV +C GLPLA   LGGLL  K    +W+RV       +S        +   +   L +SY YL   +KQCF Y + +P+DYE   G ++    A G    +   E   T ED+G +  +EL  RS       D          MHDL+ ++
Sbjct:  351 MEEIGKQIVVRCGGLPLAITVLGGLLATKSTWNEWQRVCENIKSYVSNGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVMPVKHTEAGTTVEDVGQDYLEELVKRSMVMVGRRDIVTSEVMTCRMHDLMREV 509          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.444e-13
Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 1
Query:   31 IVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLST-----KIWELQEERCDIMPALRVSYYYL-SAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHW 450
            + AKC GLPLA   +G  +  K+   +W   ++        +   EER  I+P L+ SY  L +  +K CF YCSLFP+D+E E+ ++I  W   G+++    E  G + G +I   L  R+          +  MHD+I ++A W
Sbjct:  339 VAAKCHGLPLALNVIGKAMVCKETVQEWRHAINVLNSPGHKFPGMEER--ILPILKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGTNQGYDII-GLLVRAHLLIECELTDKVKMHDVIREMALW 481          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL16_ARATH (Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 47/162 (29.01%), Postives = 78/162 (48.15%), Query Frame = 1
Query:    1 DNLLEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWER---VLSTKIWELQEERCDIMPALRVSYYYLSAP-LKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDAS----RFVMHDLINDLAHWAAGE 462
            D ++  + +++  KC GLPLA   +G  +  K    +WE    VL+    E  + +  I+P L+ SY  L    +K CF YC+LFP+D + +   +I  W   GF+   +  K   + G E+   L   +     +ND        VMHD++ ++A W A +
Sbjct:  331 DPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANLL---TNDRGFVKWHVVMHDVVREMALWIASD 489          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RPP13_ARATH (Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 54/174 (31.03%), Postives = 85/174 (48.85%), Query Frame = 1
Query:    1 DNLLEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPAL-RVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFV---MHDLINDLAHWAAGEIYFTMEYTSEVNKQQS 510
            D  L +  K++V KC GLPL    L GLL  K    +W  V ++    L+++   + P +  +S+  L    K CF Y S+FP+DYE +  ++I L  A GF+   E E   ED+     +EL  RS  +    +  + +   +HDL+ D+A   + E+ F   Y   V +  S
Sbjct:  347 DEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKTPS-EWNDVCNSLWRRLKDDSIHVAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDE-EMMMEDVARYYIEELIDRSLLEAVRRERGKVMSCRIHDLLRDVAIKKSKELNFVNVYNDHVAQHSS 518          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: R13L2_ARATH (Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana GN=RPP13L2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 50/181 (27.62%), Postives = 87/181 (48.07%), Query Frame = 1
Query:    1 DNLLEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQ---QSSNDASRFVMHDLINDLAHWAAGEIYFTMEYTSEVNKQQSFSRYLRHL 534
            D  L++I K++V KC GLP     L GL+  K    +W  V S+    ++++   +     +S+  +   LK CF Y S+FP+DYE +  ++I L  A GF+ +++ E T ED+     ++L   S  +   +       F +HDL+ +     + E+ F   Y  + +   S    + HL
Sbjct:  343 DQELQKIGKEMVQKCGGLPRTTVVLAGLMSRKKPN-EWNDVWSSL--RVKDDNIHVSSLFDLSFKDMGHELKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFI-QEDEEMTMEDVARYYIEDLVYISLVEVVKRKKGKLMSFRIHDLVREFTIKKSKELNFVNVYDEQHSSTTSRREVVHHL 519          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL7_ARATH (Probable disease resistance protein At1g58390 OS=Arabidopsis thaliana GN=At1g58390 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = 1
Query:    1 DNLLEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWER----VLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKE--REKTGEDLGLEIFKELHSRS-FFQQSSNDASRF---VMHDLINDLAHWAAGEIYF 471
            D  +E++ K+++  C GLPLA + LGGLL  K    DWER    + S  +         I   L +S+  L + LK CF Y + FP+D++    ++   W A G    ++    +T +D+G    +EL  R+    +    ASRF    +HD++ ++  + A E  F
Sbjct:  346 DEEMEDMGKQMLKHCGGLPLAIKVLGGLLAAKYTMHDWERLSVNIGSDIVGRTSSNNSSIYHVLSMSFEELPSYLKHCFLYLAHFPEDHKINVEKLSYCWAAEGISTAEDYHNGETIQDVGQSYLEELVRRNMIIWERDATASRFGTCHLHDMMREVCLFKAKEENF 512          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RX24L_ARATH (Probable disease resistance protein RXW24L OS=Arabidopsis thaliana GN=RXW24L PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 1
Query:    1 DNLLEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEER-----CDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKERE-KTGEDLGLEIFKELHSRSF-FQQSSNDASRFV---MHDLINDLAHWAAGEIYF 471
            D  +E + KK++  C GL LA + LGGLL  K    DW+R LS  I     ER       I   L VS+  L   LK CF Y + FP+D+E +  ++   W A G  +R+  + +T  D G    +EL  R+    +     SRF    +HD++ ++  + A E  F
Sbjct:  345 DEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKR-LSENIGSHIVERTSGNNSSIDHVLSVSFEELPNYLKHCFLYLAHFPEDHEIDVEKLHYYWAAEGISERRRYDGETIRDTGDSYIEELVRRNMVISERDVMTSRFETCRLHDMMREICLFKAKEENF 510          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL33_ARATH (Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana GN=At5g43740 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 47/144 (32.64%), Postives = 69/144 (47.92%), Query Frame = 1
Query:   31 IVAKCDGLPLAAQTLGGLLRGKDDRCDWER---VLSTKIWELQEERCDIMPALRVSYYYL-SAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHW 450
            + AKC GLPLA   +G  +  K+   +W     VL++   E       I+P L+ SY  L +  +K CF YCSLFP+D E  + + I  W   GF++    E  G + G +I   L  R+             MHD+I ++A W
Sbjct:  338 VAAKCHGLPLALNVIGKAMSCKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEIPKEKWIEYWICEGFINPNRYEDGGTNHGYDII-GLLVRAHLLIECELTDNVKMHDVIREMALW 480          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RP8L3_ARATH (Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana GN=RPP8L3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERC-------DIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSF-FQQSSNDASRF---VMHDLINDL 441
            +E I K++V  C GLPLA + LGGLL  K    +W+RV      ++  + C        +   L +SY  L   LK CF Y + FP+DY+ +   +   W A G  D      +GED      +EL  R+    + SN + R     MHD++ ++
Sbjct:  343 MEAIGKEMVTYCGGLPLAVKVLGGLLANKHTASEWKRVSENIGAQIVGKSCLDDNSLNSVYRILSLSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIYDGLTILDSGED----YLEELVRRNLVIAEKSNLSWRLKLCQMHDMMREV 493          
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 42/155 (27.10%), Postives = 78/155 (50.32%), Query Frame = 1
Query:   10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWE---RVLSTKIWELQEERCDIMPALRVSYYYLSAPL-KQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHWAAGE 462
            + ++ + + + C GLPLA   +G  + GK    +W     VL++   E  +     +P L+  Y  +S  + + CF YC+LFP++ +  + +++  W   G L +++RE+  E  G EI  +L       +S N  +   MH ++ ++A W A E
Sbjct:  325 IPKLARVVASTCRGLPLALNLIGEAMSGKRTVREWRYTIHVLASSTAEFPDMEDGTLPILKSIYDNMSDEIIRLCFLYCALFPENLDIGKEDLVNYWICEGILAKEDREE-AEIQGYEIICDLVRMRLLMESGN-GNCVKMHGMVREMALWIASE 477          
The following BLAST results are available for this feature:
BLAST of FC869252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
DRL4_ARATH1.444e-1333.33Putative disease resistance protein At1g50180 OS=A... [more]
DRL32_ARATH1.444e-1332.19Probable disease resistance protein At5g43730 OS=A... [more]
DRL16_ARATH2.463e-1329.01Probable disease resistance protein At1g61190 OS=A... [more]
RPP13_ARATH4.202e-1331.03Disease resistance protein RPP13 OS=Arabidopsis th... [more]
R13L2_ARATH1.597e-1227.62Putative disease resistance RPP13-like protein 2 O... [more]
DRL7_ARATH1.597e-1229.94Probable disease resistance protein At1g58390 OS=A... [more]
RX24L_ARATH4.646e-1232.93Probable disease resistance protein RXW24L OS=Arab... [more]
DRL33_ARATH4.646e-1232.64Probable disease resistance protein At5g43740 OS=A... [more]
RP8L3_ARATH6.068e-1231.61Disease resistance RPP8-like protein 3 OS=Arabidop... [more]
DRL38_ARATH6.068e-1227.10Probable disease resistance protein At5g47260 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC31010B11EF AbioticL1 Citrus clementina cDNA clone C31010B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869252 ID=FC869252; Name=FC869252; organism=Citrus clementina; type=EST; length=719bp
GATAACTTATTGGAGGAAATTCGCAAGAAGATAGTGGCCAAATGCGATGG
CTTGCCCTTGGCAGCGCAAACACTTGGAGGACTTTTGCGAGGAAAAGATG
ACAGATGTGATTGGGAGAGAGTGCTCAGTACCAAGATATGGGAATTGCAA
GAAGAGAGATGTGACATTATGCCGGCGCTTAGAGTGAGCTACTATTATCT
TTCGGCACCTTTGAAACAATGCTTTGCGTATTGCTCATTGTTTCCAAAGG
ATTATGAATTTGAAGAGGGGGAGATAATTTTGTTATGGTGTGCCTCGGGC
TTCTTGGATCGCAAAGAGCGTGAGAAAACTGGTGAAGATTTAGGTCTTGA
AATCTTTAAGGAGCTACATTCAAGATCCTTTTTCCAGCAATCAAGCAACG
ATGCATCACGATTTGTGATGCACGATCTTATCAACGACCTTGCGCATTGG
GCTGCAGGGGAAATATACTTCACAATGGAGTATACCTCTGAGGTTAACAA
GCAACAAAGTTTTTCCCGATATCTTCGTCATCTGTCATATATTCCTGAAT
ATTATGTTGGCGGTAAAAGGTTTGGGGACTTGTATGATATCCAACATTTG
AGAACTTTTTTACCAGTAATGTTGACAGAGAGTTCGCCTGGCTACTTGGC
TCCTAGCATTCTTCCTAAAGTTGCTCAACTCCACGCTTGANGGTCTTCTC
TTTGCGTGGATATCACATC
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