FC869268

Overview
NameFC869268
Unique NameFC869268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_DICT6 (Phosphoglycerate kinase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=pgk PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.809e-36
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            MAKK++ +L   +LKGK+V VR D NVP+  N  ITDD RIR A+PTIK+LI  GAKVIL SHLGRPKG      L P+  RLSELLG  V K +DCIG EVEK ++++ EG V+LLEN+RFYKEEE   PE
Sbjct:    1 MAKKTILDLQDEELKGKRVLVRVDFNVPIK-NGVITDDRRIREALPTIKYLIDRGAKVILVSHLGRPKGFQDDLRLDPVAKRLSELLGKPVKKLNDCIGEEVEKEISNMKEGDVVLLENIRFYKEEEANDPE 131          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.294e-35
Identity = 80/136 (58.82%), Postives = 92/136 (67.65%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            M KK++  LS AD++GK+V VR D NVPLDD  NITDDTRIRAA+PTI+ LI  GAKVIL SH GRPKG V     L P   RLSELLG  VV  DDC+G  V + V  L  G V LLEN+RF+ EEE   PE  +
Sbjct:    1 MPKKTIANLSRADVEGKRVLVRVDFNVPLDDAGNITDDTRIRAALPTIQDLISKGAKVILCSHFGRPKGKVVESMRLTPTAKRLSELLGQDVVMCDDCVGASVTEAVNKLENGQVALLENLRFHAEEEGNDPEFSK 136          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.294e-35
Identity = 80/133 (60.15%), Postives = 92/133 (69.17%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            M+KK++  L+ ADL GK+V VRAD NVPLD +  ITDDTRIRAA+PTI+ L   GAKVIL+SH GRPKG V     L P+  RLSELLG  V K DDCIG EV   V +L  G V LLENVRF+  EE   PE
Sbjct:    1 MSKKTIANLTSADLSGKRVLVRADFNVPLDGDGKITDDTRIRAALPTIQDLTSKGAKVILASHFGRPKGQVNESMRLTPVAARLSELLGQAVTKCDDCIGDEVAAKVGALQNGQVALLENVRFHSGEEANDPE 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.690e-35
Identity = 78/129 (60.47%), Postives = 91/129 (70.54%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  L+  DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  LI  GAKVILS+H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++  G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNDTGAITDDTRIRAALPTINDLIGKGAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVGAMANGDVVLLENVRFFAEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNPW (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH7803) GN=pgk PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.690e-35
Identity = 78/129 (60.47%), Postives = 92/129 (71.32%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  L+  DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  LI  GAKVILS+H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++ +G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLIGKGAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVGAMADGDVVLLENVRFFAEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_GEOLS (Phosphoglycerate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pgk PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.690e-35
Identity = 72/124 (58.06%), Postives = 94/124 (75.81%), Query Frame = 2
Query:  329 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            DLKGKKVF+R D NVP D+  NIT+DTRI  AVPTIK+ ++ GAKV+L+SHLGRPKG    K+++AP   RLS+LLG +V++A DC GP+V K++ S+  G V++LENVRFY  EEK  PE  +
Sbjct:   11 DLKGKKVFIRVDFNVPQDEKGNITEDTRIAGAVPTIKYAVEQGAKVVLASHLGRPKGEKKSKYTMAPAAKRLSQLLGKKVMQAPDCFGPDVSKIIDSMKPGDVVMLENVRFYPGEEKNDPEFAQ 134          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35
Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            M+KKSV +LS ADL+GK+V VR D NVP+D+   ITD+TRIRAA+PTI+ LI  GAKVIL SH GRPKGV  K  L P+  RLSELL   V K DDCIG  V     ++  G V LLENVRF+  EEK  PE
Sbjct:    1 MSKKSVAQLSAADLEGKRVLVRVDFNVPVDEKGVITDETRIRAALPTIQDLISKGAKVILVSHFGRPKGVDEKLRLTPVAQRLSELLHKPVAKLDDCIGDAVIAHTQAMANGDVCLLENVRFHPGEEKNDPE 132          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_TRIEI (Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 81/133 (60.90%), Postives = 96/133 (72.18%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            M KK+V  LS +DL GKKV +RAD NVP+D N +ITDDTRIRAA+PTI+ L + GAKVIL+SH GRPKG V  K  L  +  RLSE+LG +V K DDCIG EV   VA + +G V+LLENVRFY  EE   PE
Sbjct:    1 MTKKTVASLSKSDLSGKKVLMRADFNVPVD-NGSITDDTRIRAALPTIQDLTEKGAKVILTSHFGRPKGKVNEKMRLTLVGERLSEVLGKEVKKCDDCIGDEVTSTVAEMKDGDVVLLENVRFYSGEEGNDPE 132          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 79/133 (59.40%), Postives = 95/133 (71.43%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            MAK+S+  LS  DL GK+V VR D NVPL++  +ITDDTRIRAA+PTI+HLI+  A+VILS+H GRPKG V     L P+  RLSELLG  VVK + CIGP+ EK V  +  G V+LLENVRF  EEEK   E
Sbjct:    1 MAKRSLSNLSVEDLCGKRVLVRVDFNVPLNEEGSITDDTRIRAALPTIQHLIEKEARVILSAHFGRPKGKVNEDMRLTPVSQRLSELLGKTVVKTESCIGPDAEKKVHEMSNGDVVLLENVRFIGEEEKNDSE 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ANADF (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pgk PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 81/131 (61.83%), Postives = 94/131 (71.76%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV---TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MA K++  L   DL GK+VF+R D NVPLD+ + +TDD RIRAA+PTIKH IQ  AKVIL SHLGRPKG      KFSL P   RLSELL   V+ ADDCIG  V+KLV  L EG VLLLEN+RF+ +EEK
Sbjct:    1 MALKTIDAL---DLAGKRVFIRVDFNVPLDEQRRVTDDARIRAALPTIKHAIQARAKVILGSHLGRPKGKPDDREKFSLEPAAQRLSELLKQDVILADDCIGDGVKKLVRDLKEGQVLLLENLRFHPQEEK 128          
The following BLAST results are available for this feature:
BLAST of FC869268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_DICT65.809e-3660.61Phosphoglycerate kinase OS=Dictyoglomus thermophil... [more]
PGK_CYAP71.294e-3558.82Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_ACAM11.294e-3560.15Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_SYNSC1.690e-3560.47Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNPW1.690e-3560.47Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_GEOLS1.690e-3558.06Phosphoglycerate kinase OS=Geobacter lovleyi (stra... [more]
PGK_THEEB2.883e-3559.85Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_TRIEI6.422e-3560.90Phosphoglycerate kinase OS=Trichodesmium erythraeu... [more]
PGK_PROMA6.422e-3559.40Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ANADF6.422e-3561.83Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC31010D04EF AbioticL1 Citrus clementina cDNA clone C31010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869268 ID=FC869268; Name=FC869268; organism=Citrus clementina; type=EST; length=702bp
GAAAACCACTTCCCATTTCCCCACTTTGTCGACAAAGTTTCAATCTTTTG
CGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGGCTTCAGCCACC
GCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTC
TTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGC
TGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGG
CTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAA
GAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGT
TTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACT
GATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCA
AAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTG
TTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTC
CTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGA
AAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAAACG
TGAGGTTCTACAAAGAGGAGGAAAAAACGATCCCTGAGTTGCAAGAAAGC
TG
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