FC869268

Overview
NameFC869268
Unique NameFC869268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.388e-35
Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  L+  DL GK+V VR D NVPL++   ITDDTRIRAA+PTI  LI  GAKVILS+H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++ +G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNEAGAITDDTRIRAALPTINDLIGKGAKVILSAHFGRPKGQVNDAMRLTPVAARLSELLGKPVAKTDSCIGPDAEAKVNAMADGDVVLLENVRFFAEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34
Identity = 74/129 (57.36%), Postives = 94/129 (72.87%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  LS ADL+ K+V VR D NVPL++N  ITDDTRIRAA+PTI  LI  GA+VILS+H GRPKG +     L P+  RLSELLG  V+K + C+G + E  V ++ +G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLSSLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPVAKRLSELLGKTVIKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_GEOMG (Phosphoglycerate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgk PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.431e-34
Identity = 77/129 (59.69%), Postives = 96/129 (74.42%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MA + + E+    LKGKKVF+R D NVPLD++QNIT+DTRIRA +PTI   +  GAKVIL+SHLGRPKG   PK+S+AP   RLS LL  +V  A DCIG EV+K++ ++  G VLLLENVRFY+ EEK
Sbjct:    1 MAIRYIDEIES--LKGKKVFIRVDFNVPLDEHQNITEDTRIRAVLPTINFALDAGAKVILASHLGRPKGERKPKYSMAPAAKRLSRLLNKEVQLAPDCIGDEVKKMIDAMKPGEVLLLENVRFYEGEEK 127          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 74/129 (57.36%), Postives = 93/129 (72.09%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  LS ADL+ K+V VR D NVPL++N  ITDDTRIRAA+PTI  LI  GA+VILS+H GRPKG +     L P+  RLSELLG  V K + C+G + E  V ++ +G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPVAKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 75/129 (58.14%), Postives = 90/129 (69.77%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  L+  DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  L+  GAKV+L++H GRPKG V     L P+  RLSELLG  V K D CIGP+ E  V ++  G V+LLENVRF  EEEK
Sbjct:    1 MAKRSLASLNAGDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLVGKGAKVVLAAHFGRPKGQVNEAMRLTPVAARLSELLGKTVTKTDSCIGPDAEAKVGAMANGDVVLLENVRFVAEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+ +L+ +DL GK+V VR D NVPL+D   ITDDTRIRAA+PTI  LI  GAKVIL++H GRPKG V  K  L P+  RLSELL   V K + CIGP+ E  V ++  G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLAKLNTSDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLIGKGAKVILAAHFGRPKGQVNDKMRLTPVATRLSELLSKPVTKTESCIGPDAEAKVNAMANGDVVLLENVRFFAEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNR3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain RCC307) GN=pgk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            MAK+S+  L+   L+GK+V VR D NVPL+D   ITDDTRIRAA+PTIK L   GAKVILS+H GRPKG V     L P+  RLSELLG  V K D CIG + E  VA++ +G V+LLENVRF+ EEEK
Sbjct:    1 MAKRSLSALNSDALRGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTIKDLTGKGAKVILSAHFGRPKGQVNEDMRLTPVAARLSELLGAPVAKTDSCIGSDAEAKVAAMADGDVVLLENVRFFAEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 85/144 (59.03%), Postives = 96/144 (66.67%), Query Frame = 2
Query:  293 MAKKSVGEL--SGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRP----------KGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            MAK+++G L  SG DL GK+V VRAD NVPLD   NITDDTRIRAA+PT++ L Q GAKVIL+SHLGRP          K      SLAP+  RLS+LLG  V  A DCIGPE E +V  L  G V LLENVRFY EEE   PE
Sbjct:    1 MAKQTLGSLLSSGFDLAGKRVLVRADFNVPLDAQGNITDDTRIRAALPTVQALTQAGAKVILTSHLGRPVKKDKETGAVKVAREGNSLAPVATRLSQLLGQPVAFAPDCIGPEAEAVVNRLENGQVALLENVRFYPEEEDNDPE 144          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34
Identity = 84/144 (58.33%), Postives = 99/144 (68.75%), Query Frame = 2
Query:  293 MAKKSVGEL--SGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRP----------KGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            MAK+++G L  SG DLKGK+V VRAD NVPLD   NITDDTRIRA++PTI+ L Q GAKVIL+SHLGRP          +      SLAP+  RL++LLG  V  A DCIGPE E +V+SL  G V LLENVRF+ EEE   PE
Sbjct:    1 MAKQTLGSLLSSGFDLKGKRVLVRADFNVPLDPQGNITDDTRIRASLPTIQALAQAGAKVILTSHLGRPIQKDKATGAIQIAREGNSLAPVAVRLAQLLGQPVAFAPDCIGPEAEAVVSSLENGQVALLENVRFHPEEEANDPE 144          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.101e-34
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            MAK+S+  LS  +L GK+VFVR D NVP++   +ITDDTRIRAA+PTIK LI  GA+VILS+H GRPKG V     L P+  RLSELLG  V+K D CIG + +    SL  G V+LLENVRF + EEK  P+
Sbjct:    1 MAKRSLSSLSAEELCGKRVFVRVDFNVPVNAEGDITDDTRIRAALPTIKDLIDKGARVILSAHFGRPKGQVNDAMRLTPVAQRLSELLGHTVIKTDSCIGSDAQAKAQSLNNGDVMLLENVRFIQGEEKNDPD 133          
The following BLAST results are available for this feature:
BLAST of FC869268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SYNPX8.388e-3559.69Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM31.095e-3457.36Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_GEOMG1.431e-3459.69Phosphoglycerate kinase OS=Geobacter metallireduce... [more]
PGK_PROMM1.869e-3457.36Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNS93.187e-3458.14Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNS33.187e-3458.91Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNR33.187e-3459.69Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNJB3.187e-3459.03Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]
PGK_SYNJA4.163e-3458.33Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROM47.101e-3457.14Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionC31010D04EF AbioticL1 Citrus clementina cDNA clone C31010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869268 ID=FC869268; Name=FC869268; organism=Citrus clementina; type=EST; length=702bp
GAAAACCACTTCCCATTTCCCCACTTTGTCGACAAAGTTTCAATCTTTTG
CGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGGCTTCAGCCACC
GCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTC
TTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGC
TGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGG
CTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAA
GAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGT
TTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACT
GATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCA
AAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTG
TTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTC
CTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGA
AAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAAACG
TGAGGTTCTACAAAGAGGAGGAAAAAACGATCCCTGAGTTGCAAGAAAGC
TG
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