FC869268

Overview
NameFC869268
Unique NameFC869268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PORGI (Phosphoglycerate kinase OS=Porphyromonas gingivalis GN=pgk PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.101e-34
Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 2
Query:  338 GKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 673
            GKK FVR D NVPLDDN  ITDDTRIRAA+PT++ +I +G   I+ SHLGRPKGV P+FSL  ++P +SELLG+ V+ ADDCIG +     A L  G VLLLEN+RFY EEE
Sbjct:   10 GKKAFVRVDFNVPLDDNFKITDDTRIRAALPTLRKIIADGGMTIIGSHLGRPKGVAPEFSLRHILPHVSELLGVDVLFADDCIGADAMDKAAKLKAGQVLLLENLRFYAEEE 121          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34
Identity = 80/136 (58.82%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            M KKS+  LS AD+ GK+V VR D NVPLD    ITDDTRIRAA+PTIK LI+ GAKVIL SH GRPKG V     L P+  RLSELLG  VV  DDCIG  V   +  L  G V LLEN+RF+ EEE   PE  +
Sbjct:    1 MTKKSIVNLSPADVAGKRVLVRVDFNVPLD-GATITDDTRIRAALPTIKDLIEKGAKVILCSHFGRPKGQVVESMRLTPVATRLSELLGQPVVMCDDCIGDSVTAAINQLQNGQVALLENLRFHAEEEANDPEFAQ 135          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACCN (Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pgk PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34
Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            M KKS+ ++   DLKGK+VF R D NVP+ D + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP V+++VA++ EG +L+LENVRFY  EEK   EL
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKDGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAVRLGELLGKDVKKADEAFGPAVQEMVAAMNEGDILVLENVRFYAGEEKNDAEL 130          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33
Identity = 77/133 (57.89%), Postives = 97/133 (72.93%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            M KK+V ++   D+ GK+V VR D NVP+D+N+NITDD RIR A+PTI++LI + AKVIL SHLGRPKG   P +SL P+  RLSELL   V+ A+D IG + +   A+L EG VLLLENVRF+ EEEK  PE
Sbjct:    1 MKKKTVRDI---DVSGKRVLVRVDFNVPMDENKNITDDRRIREALPTIEYLINHNAKVILVSHLGRPKGKFNPDYSLKPVAKRLSELLKKPVIMAEDVIGEDAKVKAAALKEGEVLLLENVRFHAEEEKNDPE 130          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP V+++VA++ EG VL+LENVRFY  EEK   EL
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAMNEGDVLVLENVRFYAGEEKNDAEL 130          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP V+++VA++ EG VL+LENVRFY  EEK   EL
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAMNEGDVLVLENVRFYAGEEKNDAEL 130          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.698e-33
Identity = 75/129 (58.14%), Postives = 93/129 (72.09%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            M+K S+  L  + L+GKKV VR D NVPL+D+  ITDDTRIRAA+PTIK+LI N AKVIL++H GRPKG V  +  L P+  RLSE+LG +V   + CIG E  +   +L  G VLLLENVRFY+EEEK
Sbjct:    1 MSKLSLSSLDKSKLEGKKVLVRVDFNVPLNDDGQITDDTRIRAAIPTIKYLINNSAKVILAAHFGRPKGKVNERMRLTPIAARLSEILGKKVNLTESCIGEEALEKSNNLNNGDVLLLENVRFYEEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACTN (Phosphoglycerate kinase OS=Bacteroides thetaiotaomicron GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33
Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = 2
Query:  338 GKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 673
            GKK FVR D NVPLD+N NITDDTR+RAA+PT+K ++ +G  +I+ SHLGRPKGV  KFSL  ++  LSELLG++V  A+DC+G E     A+L  G VLLLEN+RFY EEE
Sbjct:   11 GKKAFVRVDFNVPLDENFNITDDTRMRAALPTLKKILADGGSIIIGSHLGRPKGVADKFSLKHIIKHLSELLGVEVQFANDCMGEEAAVKAAALQPGEVLLLENLRFYAEEE 122          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33
Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KKSV ++   D+KGK VF R D NVP+ D + +TDDTRIRAA+PTI++L   GAKV+L+SHLGRPKG VT +  L P+  RL ELLG +V KAD+  G  V+K ++ L +G VL+LENVRFY  EEK  PEL ++
Sbjct:    1 MNKKSVKDI---DVKGKVVFCRVDFNVPMKDGK-VTDDTRIRAALPTIEYLTGQGAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQISDLKDGDVLVLENVRFYPGEEKNDPELSKA 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACCQ (Phosphoglycerate kinase OS=Bacillus cereus (strain Q1) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33
Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP  +++VA++ EG VL+LENVRFY  EEK   EL
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKNDAEL 130          
The following BLAST results are available for this feature:
BLAST of FC869268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PORGI7.101e-3462.50Phosphoglycerate kinase OS=Porphyromonas gingivali... [more]
PGK_CYAP89.274e-3458.82Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_BACCN9.274e-3457.46Phosphoglycerate kinase OS=Bacillus cereus subsp. ... [more]
PGK_THETN1.211e-3357.89Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_BACCZ1.582e-3357.46Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC11.582e-3357.46Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_PROM52.698e-3358.14Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BACTN6.011e-3360.71Phosphoglycerate kinase OS=Bacteroides thetaiotaom... [more]
PGK_BACP26.011e-3356.20Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_BACCQ6.011e-3356.72Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC31010D04EF AbioticL1 Citrus clementina cDNA clone C31010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869268 ID=FC869268; Name=FC869268; organism=Citrus clementina; type=EST; length=702bp
GAAAACCACTTCCCATTTCCCCACTTTGTCGACAAAGTTTCAATCTTTTG
CGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGGCTTCAGCCACC
GCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTC
TTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGC
TGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGG
CTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAA
GAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGT
TTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACT
GATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCA
AAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTG
TTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTC
CTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGA
AAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAAACG
TGAGGTTCTACAAAGAGGAGGAAAAAACGATCCCTGAGTTGCAAGAAAGC
TG
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