FC869268

Overview
NameFC869268
Unique NameFC869268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROMS (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            M+K S+  L    L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++LI + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL  G VLLLENVRF+ EEEK   E  E
Sbjct:    1 MSKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAVAQSNSLSNGDVLLLENVRFFGEEEKNDLEFAE 136          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PELPD (Phosphoglycerate kinase OS=Pelobacter propionicus (strain DSM 2379) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 2
Query:  326 ADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQE 697
            ADLK KKVF+R D NVP D   NIT+DTRI  A+PTI++ I+ GA+VIL+SHLGRPKG    K+S+ P   RLSELLG +V +A DC G EV + + ++  G VL+LENVRFY  EEK  P+  +
Sbjct:   10 ADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILASHLGRPKGEKNEKYSMVPAAKRLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVRFYPGEEKNDPKFAQ 134          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_EXISA (Phosphoglycerate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 75/134 (55.97%), Postives = 97/134 (72.39%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVT-PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPEL 691
            M K+S+ ++   D+KGK+VF R D NVPL D   I D+TRI+AA+PTIKHL+  GAK++L+SHLGRPKG   P+FSLAP+  RL+ELLG  V   ++  GP  E+ VA+L EG V++LENVRFY  E K  PEL
Sbjct:    1 MNKQSIRDI---DVKGKRVFCRVDFNVPLKDGV-IQDETRIQAALPTIKHLLDGGAKLVLASHLGRPKGEKKPEFSLAPVAKRLAELLGKDVPLVEEAYGPVAEEAVANLSEGDVVVLENVRFYPGETKNDPEL 130          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KK+V ++   D+KGK+VF R D NVP+  N  +TDDTRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RLSELLG +VVK D+  G  V+  +A + EG VLLLENVRFY  EEK  PEL ++
Sbjct:    1 MNKKTVRDI---DVKGKRVFCRVDFNVPMQ-NGVVTDDTRIRAALPTIQYLMEQGAKVILASHLGRPKGKVVEEMRLNAVAERLSELLGKRVVKTDEAYGDTVKAAIAEMNEGDVLLLENVRFYPGEEKNDPELAKA 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_ANAD2 (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 72/123 (58.54%), Postives = 87/123 (70.73%), Query Frame = 2
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV---TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            +   +L GK+VF+R D NVPLD    +TDD RIRAA+PTI+H IQ  AKVIL+SHLGRPKG      K +L P   RLSELL   V+ ADDC+G  V+KLV  L +G VLLLEN+RF+ EEEK
Sbjct:    6 IDALELAGKRVFIRVDFNVPLDPQGRVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPEDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEK 128          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 74/129 (57.36%), Postives = 90/129 (69.77%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            M+K S+  L   +L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++LI + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL  G VLLLENVRF+ EEEK
Sbjct:    1 MSKLSLSSLDKTNLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAVAQSNSLSNGDVLLLENVRFFGEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 76/137 (55.47%), Postives = 97/137 (70.80%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KK++ +L    ++GK+VF R D NVPL D + ITDDTRIRAA+PTI+ L   GAKVIL+SHLGRPKG V  +  L P+  RLS+LLG +V+K D   G EV++ ++ L  GGVLL+ENVRF   EEK  PEL E+
Sbjct:    1 MNKKTINDLQ---VEGKRVFTRVDFNVPLKDGE-ITDDTRIRAALPTIEQLTAQGAKVILASHLGRPKGTVVEELRLDPVADRLSDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFEAGEEKNDPELVEA 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_GEOSM (Phosphoglycerate kinase OS=Geobacter sp. (strain M21) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 2
Query:  329 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            +L GKK+F+R D NVPLDDNQNIT+DTRIRA +P+I + +   AK+IL+SHLGRPKG    K+S+AP   RLS LLG +V  A DCIG EV+ ++ ++  G V++LENVRFY  EEK
Sbjct:   11 NLSGKKLFMRVDFNVPLDDNQNITEDTRIRAVLPSINYALDQKAKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIMLENVRFYAGEEK 127          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KK++ ++   D+KGK VF R D NVP+ D + +TDDTRIRAA+PTIKHL   GAKV+L+SHLGRPKG V  +  L P+  RL ELLG +V KAD+  G  V+  ++ + +G VL+LENVRFY  EEK  PEL ++
Sbjct:    1 MNKKTLKDI---DVKGKVVFCRVDFNVPMKDGE-VTDDTRIRAALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVKAQISEMKDGDVLVLENVRFYPGEEKNDPELAKA 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KK+V ++   D+KGK+VF R D NVP++ N  ITDDTRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RLSELLG  V K D+  G  V++ ++ + EG VLLLENVRFY  EEK  PEL ++
Sbjct:    1 MNKKTVRDV---DVKGKRVFCRVDFNVPME-NGAITDDTRIRAALPTIRYLMEQGAKVILASHLGRPKGKVVEELRLNAVARRLSELLGKHVTKTDEAYGDAVKEAISKMNEGDVLLLENVRFYPGEEKNDPELAKA 133          
The following BLAST results are available for this feature:
BLAST of FC869268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMS3.896e-3255.88Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PELPD3.896e-3256.00Phosphoglycerate kinase OS=Pelobacter propionicus ... [more]
PGK_EXISA3.896e-3255.97Phosphoglycerate kinase OS=Exiguobacterium sp. (st... [more]
PGK_ANOFW3.896e-3256.20Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_ANAD23.896e-3258.54Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_PROM95.089e-3257.36Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_OCEIH5.089e-3255.47Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_GEOSM5.089e-3258.12Phosphoglycerate kinase OS=Geobacter sp. (strain M... [more]
PGK_BACSU5.089e-3254.01Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_GEOSW8.680e-3255.47Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionC31010D04EF AbioticL1 Citrus clementina cDNA clone C31010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869268 ID=FC869268; Name=FC869268; organism=Citrus clementina; type=EST; length=702bp
GAAAACCACTTCCCATTTCCCCACTTTGTCGACAAAGTTTCAATCTTTTG
CGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGGCTTCAGCCACC
GCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTC
TTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGC
TGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGG
CTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAA
GAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGT
TTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACT
GATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCA
AAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTG
TTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTC
CTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGA
AAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAAACG
TGAGGTTCTACAAAGAGGAGGAAAAAACGATCCCTGAGTTGCAAGAAAGC
TG
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