FC869268

Overview
NameFC869268
Unique NameFC869268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROM2 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 74/129 (57.36%), Postives = 89/129 (68.99%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            M+K S+  L    L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++LI + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL  G VLLLENVRF+ EEEK
Sbjct:    1 MSKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAIAQSNSLSNGDVLLLENVRFFGEEEK 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 73/137 (53.28%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KK++ ++   D+KGK+VF R D NVP+ D + +TD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RL  LLG  V KAD+  G EV+K +  + EG VL+LENVRFY  EEK  PEL ++
Sbjct:    1 MNKKTLKDI---DVKGKRVFCRVDFNVPMKDGK-VTDETRIRAAIPTIQYLVEQGAKVILASHLGRPKGEVVEELRLNAVAERLQALLGKDVAKADEAFGEEVKKTIDGMSEGDVLVLENVRFYPGEEKNDPELAKA 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_GEOUR (Phosphoglycerate kinase OS=Geobacter uraniireducens (strain Rf4) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31
Identity = 70/129 (54.26%), Postives = 94/129 (72.87%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            M+ + + E+S  DL+ KK+F+R D NVPLD++QNIT+DTRIRA +PTI + +   AKV+L+SHLGRPKG    K+S+AP   RLS LLG +V  A DCIG  V K++ S+  G V++LEN+RFY  EEK
Sbjct:    1 MSIRYIDEIS--DLREKKIFMRVDFNVPLDEHQNITEDTRIRAVLPTINYALDYNAKVVLASHLGRPKGERNAKYSMAPAAKRLSRLLGKEVKLAPDCIGDGVSKIIDSMQPGDVVMLENLRFYPGEEK 127          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_DESAH (Phosphoglycerate kinase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=pgk PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 2
Query:  302 KSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            K+V E+   +   K V VR D N+P+D+N NI DD RIRA +P + +L+  GAK++L+SH+GRPKG      SLAP   RLSELLG +VV  DDCIGP+V++ V  L  G ++LLEN+RFYK EE+  PE   S
Sbjct:    2 KTVREI---EFNSKTVLVRVDYNLPMDENGNIADDNRIRATLPLVNYLVDKGAKIVLASHMGRPKGKPAASLSLAPAAKRLSELLGFEVVFVDDCIGPKVKERVDQLEPGQIILLENLRFYKGEEENDPEFARS 132          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PENCI (Phosphoglycerate kinase OS=Penicillium citrinum GN=PGKA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 68/121 (56.20%), Postives = 90/121 (74.38%), Query Frame = 2
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 673
            ++  DLKGK+V +R D NVPLD+N+N+T+  RI  A+PTIK+ I NGAK V+L SHLGRP G V PK+SL P+VP L +LLG  V  A+DC+GP+ E+ V    +G V+LLEN+RF+ EEE
Sbjct:    9 VTDVDLKGKRVLIRVDFNVPLDENKNVTNPQRIVGALPTIKYAIDNGAKAVVLMSHLGRPDGKVNPKYSLKPVVPVLEKLLGKSVTFAEDCVGPQTEETVNKASDGQVILLENLRFHAEEE 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_GEOBB (Phosphoglycerate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pgk PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 2
Query:  329 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            +L GKK+F+R D NVPLDD+QNIT+DTRIRA +P+I + +   AK+IL+SHLGRPKG    K+S+AP   RLS LLG +V  A DCIG EV+ ++ ++  G V++LENVRFY  EEK
Sbjct:   11 NLSGKKLFMRVDFNVPLDDHQNITEDTRIRAVLPSINYALDQKAKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIMLENVRFYAGEEK 127          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 71/133 (53.38%), Postives = 96/133 (72.18%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPE 688
            M KK++ ++S   L+GK+V +R D NVPLD ++NITD+ RI  A+P+I+ +I NG ++IL SHLGRPKG V P FSL+P+  RLSELL   V  A DCIG EV + V +L +G VL+LEN+RF+ EEE   P+
Sbjct:    1 MQKKTLSDIS---LQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSHLGRPKGKVNPAFSLSPVAKRLSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRFHPEEEANDPD 130          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_BACLD (Phosphoglycerate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pgk PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.298e-31
Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKTIPELQES 700
            M KKSV ++   D+KG+ VF R D NVP+ D + +TDDTRIRAA+PTI++L + GAKV+L+SHLGRPKG V+ +  L P+  RL EL+G +V KAD+  G  V+  ++ + +G +L+LENVRFY  EEK  PEL ++
Sbjct:    1 MNKKSVKDI---DVKGRVVFCRVDFNVPMKDGK-VTDDTRIRAALPTIQYLTEQGAKVLLASHLGRPKGQVSEELRLTPVAARLGELIGKEVKKADEAYGDAVKAQISEMKDGDILVLENVRFYPGEEKNDPELSKA 133          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PENCH (Phosphoglycerate kinase OS=Penicillium chrysogenum GN=PGKA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.308e-31
Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 2
Query:  317 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEE 673
            ++  DLKGK+V +R D NVPLD+N+N+T+  RI  A+PTIK+ I NG K V+L SHLGRP G V PK+SL P+VP L ELLG  V   +DCIGP+ E+ V    +G V+LLEN+RF+ EEE
Sbjct:    9 VTDVDLKGKRVLIRVDFNVPLDENENVTNPQRIVGALPTIKYAIDNGRKAVVLMSHLGRPDGKVNPKYSLKPVVPVLEELLGKSVTFTEDCIGPQTEETVNKASDGQVILLENLRFHAEEE 129          
BLAST of FC869268 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.597e-31
Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 2
Query:  293 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEK 676
            M+K S+  L    L+GKKV VR D NVPL+++  ITDDTRIRAA+PTI++L+ + AKVIL++H GRPKG V  K  L P+  RLSELLG  V   + CIG E      SL    VLLLENVRF+ EEEK
Sbjct:    1 MSKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLVNHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQSVALTNSCIGDEAVAKSNSLSNRDVLLLENVRFFGEEEK 129          
The following BLAST results are available for this feature:
BLAST of FC869268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROM21.134e-3157.36Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BACME1.134e-3153.28Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]
PGK_GEOUR1.481e-3154.26Phosphoglycerate kinase OS=Geobacter uraniireducen... [more]
PGK_DESAH1.481e-3151.49Phosphoglycerate kinase OS=Desulfobacterium autotr... [more]
PGK_PENCI1.934e-3156.20Phosphoglycerate kinase OS=Penicillium citrinum GN... [more]
PGK_GEOBB1.934e-3157.26Phosphoglycerate kinase OS=Geobacter bemidjiensis ... [more]
PGK_CHLTE1.934e-3153.38Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_BACLD3.298e-3151.82Phosphoglycerate kinase OS=Bacillus licheniformis ... [more]
PGK_PENCH4.308e-3156.20Phosphoglycerate kinase OS=Penicillium chrysogenum... [more]
PGK_PROM09.597e-3155.81Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionC31010D04EF AbioticL1 Citrus clementina cDNA clone C31010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869268 ID=FC869268; Name=FC869268; organism=Citrus clementina; type=EST; length=702bp
GAAAACCACTTCCCATTTCCCCACTTTGTCGACAAAGTTTCAATCTTTTG
CGCCTTTACTACGCCCCTCCACTCCCGCCACATCAATGGCTTCAGCCACC
GCTCCCACTACTTTCTCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTC
TTCCCCACGCGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGC
TGGGGTTCTCCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGG
CTGAGCTCGATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAA
GAAGAGCGTGGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGT
TTGTAAGAGCTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACT
GATGATACTAGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCA
AAATGGAGCTAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTG
TTACTCCGAAATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTC
CTGGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGA
AAAGCTTGTAGCCTCACTTCCTGAAGGCGGTGTTCTTCTTCTTGAAAACG
TGAGGTTCTACAAAGAGGAGGAAAAAACGATCCCTGAGTTGCAAGAAAGC
TG
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