FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROMM (Dihydrodipicolinate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.071e-27 Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 RL+TA+ TP+ DG DL L + G++G++V GTTGE +SW E L+G G VKV+ TGSNST EAI AT Q AVG AL + PYY K EGL +HF ++ P + +YN+P RTG + P + + + PN+ K Sbjct: 14 RLLTAMVTPFDADGCVDLALAGRLARYLVDEGSDGLVVCGTTGESPTLSWQEQHQLLGVVRQAVGPGVKVLAGTGSNSTAEAIEATTQAAAVGADGALVVVPYYNKPPQEGLEAHFRAIAQAAPELPLMLYNIPGRTGCSLAPATVARLMECPNVVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROM3 (Dihydrodipicolinate synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=dapA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.071e-27 Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 RL+TA+ TP+ DG DL L + G++G++V GTTGE +SW E L+G G VKV+ TGSNST EAI AT Q AVG AL + PYY K EGL +HF ++ P + +YN+P RTG + P + + + PN+ K Sbjct: 14 RLLTAMVTPFDADGCVDLALAGRLARYLVDEGSDGLVVCGTTGESPTLSWQEQHQLLGVVRQAVGPGVKVLAGTGSNSTAEAIEATTQAAAVGADGALVVVPYYNKPPQEGLEAHFRAIAQAAPELPLMLYNIPGRTGCSLAPATVARLMECPNVVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LEPBP (Dihydrodipicolinate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dapA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 61/156 (39.10%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV--LSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TA+ TP+ G+ D ++Y ++ QI +G G++ GTTGE +S++EH LI TV ++VI TGSNST+EAI TE A G+ L +NPYY K + EG+ HF ++ +S P ++YN+P RT ++ P + +A P +A +KE Sbjct: 7 TAVITPFR-QGKIDYDSYFKILENQIRSGVAGVVPCGTTGESPTLSYEEHKELIQKTVQVVSGKIQVIAGTGSNSTKEAIELTESACADGVDGILSVNPYYNKPTQEGMFQHFTAIANVSSKPVMLYNIPGRTNVNLLPETVSRLAAHPKIAAIKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LEPBA (Dihydrodipicolinate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dapA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27 Identity = 61/156 (39.10%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV--LSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TA+ TP+ G+ D ++Y ++ QI +G G++ GTTGE +S++EH LI TV ++VI TGSNST+EAI TE A G+ L +NPYY K + EG+ HF ++ +S P ++YN+P RT ++ P + +A P +A +KE Sbjct: 7 TAVITPFR-QGKIDYDSYFKILENQIRSGVAGVVPCGTTGESPTLSYEEHKELIQKTVQVVSGKIQVIAGTGSNSTKEAIELTESACADGVDGILSVNPYYNKPTQEGMFQHFTAIANVSSKPVMLYNIPGRTNVNLLPETVSRLAAHPKIAAIKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNR3 (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain RCC307) GN=dapA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R++TA+ TP+ DG DL L + +G++G++V GTTGE +SWDE + LI ++ G V V+ TGSNST EA+ AT + A+G H AL + PYY + EGL +HF +V + P + +YN+P RTG + P + N+ K Sbjct: 11 RVVTAMVTPFAADGSLDLPLAARLAQHLVAHGSDGLLVCGTTGESPTLSWDEQLALIKTVLDAVGEKVPVLAGTGSNSTAEAVEATREAAALGAHGALVVVPYYNRPPQEGLEAHFRAVAAAAPELPLMLYNIPGRTGCSLHPATTARLLDCDNVVAYK 169
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNSC (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain CC9605) GN=dapA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27 Identity = 60/159 (37.74%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R++TA+ TP+ G DL +L + G++G++V GTTGE +SWDE + L+ + G+ KV+ TGSNST EA+ AT++ A G AL + PYY K EGL +HF ++ P + +YN+P RTG I P + + PN+ K Sbjct: 14 RVVTAMVTPFDASGAVDLSVAANLARHLVEQGSDGLLVCGTTGESPTLSWDEQLQLLQAVRDAVGSDAKVLAGTGSNSTAEAVEATKEAAAAGADGALVVVPYYNKPPQEGLEAHFRAIAEAAPELPLMLYNIPGRTGCSIAPATVARLMDCPNVVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_BORPE (Dihydrodipicolinate synthase OS=Bordetella pertussis GN=dapA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27 Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + A+ TP PDG D +AY L++ + G +G++V GTTGE +S +EH LI V + VI G+NST EAIH AVG A L + PYY K + EG+ HF +V PT++YNVP RT D+ + +A+ P + G+KE Sbjct: 7 LVALVTPMQPDGSLDYDAYRSLIDWHVAEGTDGLVVVGTTGESPSVSMEEHAELIRVAVEHAAGRIPVIAGVGANSTDEAIHLARHAKAVGAQAGLSVVPYYNKPNQEGIYRHFRAVAEAVDLPTVLYNVPGRTVADMSNDTVLRLAEVPGIIGIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_ANASP (Dihydrodipicolinate synthase OS=Anabaena sp. (strain PCC 7120) GN=dapA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27 Identity = 60/159 (37.74%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 ++TA+ TP+ DG + +L + NG + ++V GTTGE +SWDE L + KVI GSNST+EAI AT++ +G+H L + PYY K GL HF ++ P ++YNVP RTGQ++ P + +A+ N+ GVKE Sbjct: 7 VLTAMITPFKADGSVNYAVAAELAANLVDNGTDTLVVCGTTGESPTLSWDEEYNLFVEVLQTVAGKAKVIAGCGSNSTKEAIAATQKAAKIGVHGTLQVVPYYNKPPQAGLYQHFQAIAQACPELPLLLYNVPGRTGQNLSPETVVRLAEIDNIVGVKE 165
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYMTH (Dihydrodipicolinate synthase OS=Symbiobacterium thermophilum GN=dapA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.185e-26 Identity = 64/160 (40.00%), Postives = 90/160 (56.25%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKE 733 RL+TA+ TP PDG D + +L + G+EG++V GTTGE +S +E + L V+ G V VI TGSN+T E+I + + G+H L + PYY K EGL HF +V P I+YNVPSRT ++ P +A+ PN+ G+KE Sbjct: 6 RLLTAMVTPMTPDGAVDYQRAGELAKHLVAAGSEGLVVSGTTGESPTLSHEEKLRLFETVVDAVGGQVSVIAGTGSNNTAESIRFSREAARTGVHGLLLVTPYYNKPPQEGLYRHFRAVAEAVDLPCILYNVPSRTSVNMLPATTLRLARDVPNIVGIKE 165
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNY3 (Dihydrodipicolinate synthase OS=Synechocystis sp. (strain PCC 6803) GN=dapA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.547e-26 Identity = 58/159 (36.48%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 ++TA+ TP+ DG D + L + I +G++G++V GTTGE +SW+E L G VI TGSN TREA+ AT+ +G+ +L + PYY K EGL++HF ++ + P + +YN+P RTGQ + P ++ +A+ N+ +KE Sbjct: 13 VLTAMVTPFNADGGVDYGVAEKLADHLITHGSDGLVVCGTTGESPTLSWEEEHELFRVVKQTVGDRGSVIAGTGSNCTREAMEATQIAAKLGVDGSLQVVPYYNKPPQEGLLAHFQAIANCAPELPLMLYNIPGRTGQSLAPETVYRLAEVENIVAIKE 171 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |