FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_NOSP7 (Dihydrodipicolinate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.547e-26 Identity = 59/159 (37.11%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 ++TA+ TP+ DG D +L NG + +++ GTTGE +SWDE L + KVI GSNST+EAI AT++ +G+H +L + PYY K GL +HF ++ P ++YNVP RTGQ++ P + +A+ N+ G+KE Sbjct: 7 VLTAMITPFKADGSVDYGVAAELAVHLANNGTDTLVMCGTTGESPTLSWDEEYQLFVEVLQSVAGKAKVIAGCGSNSTKEAIAATQKASKIGVHGSLQVVPYYNKPPQAGLEAHFQAIAQACPDLPLLLYNVPGRTGQNLQPETVARLAEVSNIVGIKE 165
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_MARAV (Dihydrodipicolinate synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=dapA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.547e-26 Identity = 62/158 (39.24%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGP---TIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + A+ TP P+G E D LV+ I NG G++ GTTGE + +EHI IGH + + VI TG NSTREAI T + +G A L + PYY K + EGL HF ++ P I+YNVP RT D+ + +A PN+ G+K+ Sbjct: 6 LVALVTPMYPNGDIHWEDLDKLVDFHIENGTHGIVAVGTTGESATLDPEEHIRTIGHIIKRVNGRIPVIAGTGGNSTREAIELTTEAHKLGADACLLVVPYYNKPTQEGLYQHFKAIAEAVPGMSQILYNVPGRTACDMLNETVVRLADIPNIVGIKD 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_MICAN (Dihydrodipicolinate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dapA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.021e-26 Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 R+ITA+ TP+ +G+ + + L + + +G++G++V GTTGE +SW E L KVI TGSNST EAI AT+Q +G+ +L + PYY K EGL HF ++ P ++YN+P RTGQ++ P I +A N+ VKE Sbjct: 9 RVITAMVTPFTVEGQVNYALVEKLADYLVTHGSDGIVVCGTTGESPTLSWQEEYELFSIVKKAVNGRGKVIAGTGSNSTSEAIEATQQAAKLGLDGSLQVVPYYNKPPQEGLYEHFLTIAKACPDLPVMLYNIPGRTGQNMTPETIIKLAAVDNIVAVKE 168
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNJA (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dapA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26 Identity = 56/159 (35.22%), Postives = 90/159 (56.60%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 R++TA+ TP+ P+G + E L + + +G++G++V GTTGE ++W E L + KVI TGSNSTREAI AT++ +G+ +L + PYY K + GL HF ++ P ++YN+P RTG + P + +A+ + +KE Sbjct: 5 RVLTAMVTPFTPEGELNYEEAARLADYLVTHGSDGLVVCGTTGESPTLTWQEEYELFRVVRDAVAGRAKVIAGTGSNSTREAIEATKKAAQLGLDGSLQVVPYYNKPTQAGLYQHFKAIAQASDLPIMLYNIPGRTGVSLQPETVAKLAELETIVAIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNS9 (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain CC9902) GN=dapA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.879e-26 Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R++TA+ TP+ G D + L + G++G++V GTTGE +SWDE + L+ G+S +V+ TGSNST EA+ AT + AVG AL + PYY K EGL HF ++ PT+ +YN+P RTG I + + PN+ K Sbjct: 14 RIVTAMVTPFDSSGAVDFQLAARLARHLVEQGSDGLLVCGTTGESPTLSWDEQLKLLEAVREAVGSSAQVLAGTGSNSTSEAVKATREAAAVGADGALVVVPYYNKPPQEGLEVHFRAIAEAAPTLPLMLYNIPGRTGCHIEAETVACLMDCPNIVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROM4 (Dihydrodipicolinate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=dapA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.879e-26 Identity = 62/159 (38.99%), Postives = 87/159 (54.72%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 RL+TA+ TP+ DG+ D L + G++G++V GTTGE +SW E L+ + G +VKV+ TGSNST EAI AT + +G AL + PYY K EGL HF S+ + P + +YN+P RTG I P + + PN+ K Sbjct: 14 RLLTAMVTPFDSDGKVDYAIAGRLARYLVDEGSDGIVVCGTTGESPTLSWSEQHQLLETVKSSVGKAVKVLAGTGSNSTAEAIEATVKAAELGADGALVVVPYYNKPPQEGLEIHFRSIANAAPDLPLMLYNIPGRTGSSIHPATVKRLMNCPNIISYK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_NITMU (Dihydrodipicolinate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dapA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.678e-26 Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + AI TP +G DLE + L++ + G +G++V GTTGE + ++EH +LI V V VI TG+NSTREAI + G A+L + PYY K + EGL HF +V P I+YNVP RT DI + +AQ PN+ G+K+ Sbjct: 10 LVAIVTPMHENGELDLERFQSLIDFHVTEGTDGIVVVGTTGESPTVDFEEHHLLIKTAVEQAAGRVPVIAGTGANSTREAIDLSIYAKNAGADASLSVVPYYNKPTQEGLYQHFRAVAEAVDIPQILYNVPGRTVADIANDTVLRLAQIPNIVGIKD 166
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNP6 (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R+ITA+ TP+ +G+ + L + G++G+++ GTTGE ++W+E + L G VI TGSN TREAI AT+ +G++ +L + PYY K EGL +HF ++ P + +YN+P RTGQ + P + +A PN+ +K Sbjct: 9 RVITAMITPFNAEGQVAYDIAQSLAVHLVEQGSDGLVICGTTGESPTLTWEEELQLFRAVKEAVGDRAAVIAGTGSNCTREAIAATQSAATLGLNGSLQVVPYYNKPPQEGLYAHFRAIAEACPDLPLMLYNIPGRTGQSLQPETVARLASLPNVVAIK 167
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNE7 (Dihydrodipicolinate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=dapA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R+ITA+ TP+ +G+ + L + G++G+++ GTTGE ++W+E + L G VI TGSN TREAI AT+ +G++ +L + PYY K EGL +HF ++ P + +YN+P RTGQ + P + +A PN+ +K Sbjct: 9 RVITAMITPFNAEGQVAYDIAQSLAVHLVEQGSDGLVICGTTGESPTLTWEEELQLFRAVKEAVGDRAAVIAGTGSNCTREAIAATQSAATLGLNGSLQVVPYYNKPPQEGLYAHFRAIAEACPDLPLMLYNIPGRTGQSLQPETVARLASLPNVVAIK 167
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROMT (Dihydrodipicolinate synthase OS=Prochlorococcus marinus (strain NATL2A) GN=dapA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25 Identity = 61/159 (38.36%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 RL+TA+ TP+ +G+ D DL N + G++G++V GTTGE +SW E L+ N G+ KV+ TGSNST EAI AT++ G AL + PYY K EGL HF ++ + P + +YN+P RTG I P ++ + N+ K Sbjct: 14 RLLTAMVTPFDDEGKVDYGLAADLANYLVDQGSDGIVVCGTTGESPTLSWQEQQKLLETVRNSLGSRAKVLAGTGSNSTSEAIEATKEAANSGADGALVVVPYYNKPPQEGLEVHFRAIANAAPKLPLMLYNIPGRTGCSISPSIVSKLMDCSNVVSFK 172 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |