FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_BIFLO (Dihydrodipicolinate synthase OS=Bifidobacterium longum GN=dapA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.455e-18 Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV--LSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 R++ A+ TP DG D A L + +GA+G++V GTTGE + DE + L+ V VI GSN T + EQ G A L + PYY + S +G++ H+ +V + P I+Y+VP RTG + +A+ ++ VK+ Sbjct: 16 RILPAMVTPMKSDGSVDFAAAQKLAKYLVADGADGLVVNGTTGESPVTHMDEKVELVRAVKEV--VDVPVISGAGSNDTAHTVRMVEQTQEAGADAVLVVMPYYSRPSQDGIVGHYKAVDESAEKPIIVYDVPGRTGLKVKVGTYDRLAELEHVKAVKD 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_BIFLD (Dihydrodipicolinate synthase OS=Bifidobacterium longum (strain DJO10A) GN=dapA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.455e-18 Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV--LSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 R++ A+ TP DG D A L + +GA+G++V GTTGE + DE + L+ V VI GSN T + EQ G A L + PYY + S +G++ H+ +V + P I+Y+VP RTG + +A+ ++ VK+ Sbjct: 16 RILPAMVTPMKSDGSVDFAAAQKLAKYLVADGADGLVVNGTTGESPVTHMDEKVELVRAVKEV--VDVPVISGAGSNDTAHTVRMVEQTQEAGADAVLVVMPYYSRPSQDGIVGHYKAVDESAEKPIIVYDVPGRTGLKVKVGTYDRLAELEHVKAVKD 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_STAS1 (Dihydrodipicolinate synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=dapA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18 Identity = 49/155 (31.61%), Postives = 85/155 (54.84%), Query Frame = 2 Query: 275 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 A+ TP+ + D +A V + N A+ ++V GTT E ++ +E ++ VN V VI TG+N+T+++I A+ + +G A + I PYY KT+ GLI+HF ++ P ++YNVPSRT I + T++++ + +K+ Sbjct: 11 ALATPFTHN-EVDFDALRRHVKYLLDNNAKSIVVNGTTAENPTLTDEEKDQILEVVVNVVDGRVPVIAGTGTNNTQKSIQASVRAREIGADAIMLITPYYNKTNQRGLIAHFTTIADAVKLPVVLYNVPSRTNMTIDAETVETLSENEYIVALKD 164
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_NOVAD (Dihydrodipicolinate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dapA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18 Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKE 733 I A+ TP+ DG FD +A+ LV+ QI NG+ ++ GTTGE +S EH +I V V VI GSN T A+ G AAL + PYY + S G+I+HF + P ++YNVP RT DI P + +A+ + G+K+ Sbjct: 6 IPALVTPFR-DGAFDEKAFRRLVDWQIENGSSALVPCGTTGEASTLSNAEHHRVIEVCVEQAAGRVPVIAGCGSNDTMNALLHMNFSKKCGAQAALCVAPYYNRPSQAGIIAHFSYLAEHNDLPIVLYNVPGRTVTDILPETVCELAKRYPDKIIGIKD 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_HELHP (Dihydrodipicolinate synthase OS=Helicobacter hepaticus GN=dapA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18 Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVN-CFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKE 733 ++A+ TP++ + + D E Y+ L+ QI G + + GTTGE +S EH+ I V C G+ VKV+ GSNST EA G A L + PYY K + EGL H+ +V + P ++YNVPSRTG I + + N+ +KE Sbjct: 6 MSALITPFI-NHKVDFETYETLIKRQITYGMDACVPVGTTGESATLSHKEHMECIEVAVAVCRGSKVKVLAGAGSNSTSEAKELALFAQKCGADALLCVTPYYNKPTQEGLFEHYKAVANAVEIPVMLYNVPSRTGVSIEIETAKRLRDACKNIYAIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_DIAST (Dihydrodipicolinate synthase OS=Diaphorobacter sp. (strain TPSY) GN=dapA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18 Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL-SMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I A+ TP DG D A L++ I G + + V GTTGE ++ +EH +I +V V ++ G+NST EAI VG + L + PYY K + EG HF ++ ++G P ++YNVP R+ D+ + + Q P + G+KE Sbjct: 12 IVALVTPMHDDGSVDYPALRKLIDWHIAEGTDCIGVVGTTGESPTVNVEEHCEIIRVSVEQAAKRVPIMAGCGANSTAEAIELARFAKKVGADSQLQVVPYYNKPTQEGQYRHFKAIAEAVGDLPMVLYNVPGRSVADMQHETVLRLTQVPGIVGIKE 169
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_ACISJ (Dihydrodipicolinate synthase OS=Acidovorax sp. (strain JS42) GN=dapA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.893e-18 Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL-SMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I A+ TP DG D A L++ I G + + V GTTGE ++ +EH +I +V V ++ G+NST EAI VG + L + PYY K + EG HF ++ ++G P ++YNVP R+ D+ + + Q P + G+KE Sbjct: 12 IVALVTPMHDDGSVDYPALRKLIDWHIAEGTDCIGVVGTTGESPTVNVEEHCEIIRVSVEQAAKRVPIMAGCGANSTAEAIELARFAKKVGADSQLQVVPYYNKPTQEGQYRHFKAIAEAVGDLPMVLYNVPGRSVADMQHETVLRLTQVPGIVGIKE 169
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_THEAB (Dihydrodipicolinate synthase OS=Thermosipho africanus (strain TCF52B) GN=dapA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18 Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKE 733 TAI TP+ +G+ D+E+Y+ L+N QI N +IV GTTGE +S DE +LI G KVI GSN I + G L + PYY K + GL ++ + I+YNVPSRTG +I P ++ +A N+ +KE Sbjct: 7 TAIVTPF-KEGKLDIESYEKLLNFQINNQINAIIVLGTTGEAPNISLDEREILIKKAKEVSGNKAKVIVGAGSNGINHTIELIKNAEKNGADGLLIVTPYYNKPTQNGLYEYYKYISEHTDLEIIVYNVPSRTGINILPETVYKIASDCKNVKALKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LACH4 (Dihydrodipicolinate synthase OS=Lactobacillus helveticus (strain DPC 4571) GN=dapA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18 Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV-GMHAALHINPYYGKTSLEGLISHFDSVLS--MGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 L+TAI TP+ + + D ++ L N I G G ++GGTTGE ++ DE I L VI TGSN+T E I T + + G+ AL + P Y K + +++HF +V P +IYN+P RTG + + ++Q N+ G+K+ Sbjct: 9 LLTAIVTPFDENKKIDFDSLKKLTNYLIDQGCNGFVIGGTTGETPTLTHDEKIELYKQFGQIVNGRAVVIAGTGSNNTAETIKFTNEVAEIDGIDYALVVVPPYNKPNQRSMVAHFTAVNDNVKMPFLIYNIPGRTGVRMEKETVVQLSQLDNIKGIKQ 167
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_ANAMF (Dihydrodipicolinate synthase OS=Anaplasma marginale (strain Florida) GN=dapA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18 Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 251 IKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV--LSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 +K + TA+ TP+ D D A V+ QI +G G++ GTTGE ++++E+ ++ + + VI GS+ T E I + G AAL + PYY + S EG+ HF +V + P ++YNVP RT DI I +A+ P + G+K+ Sbjct: 1 MKLSGVFTALATPFRDDLSLDERALASFVDWQISSGISGIVPCGTTGESATLNFEEYCTVVRLCIETARGRILVIAGAGSHCTTETISRALFVQSAGADAALIVVPYYNRPSDEGVYQHFRAVHDATNIPIVLYNVPQRTAIDISNDTIRRIAELPRVVGIKD 163 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |