FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNS3 (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain CC9311) GN=dapA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25 Identity = 64/158 (40.51%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGV 727 RL+TA+ TP+ +GR D L + G+EG++V GTTGE +SW E + ++ G VKV+ TGSNST EA+ AT + A G AL + PYY K EGL +HF ++ + P + +YNVP RTG + P T AQ N A V Sbjct: 14 RLLTAMVTPFDAEGRVDFALAGRLARHLVEEGSEGLVVCGTTGESPTLSWQEQVKMLEVVRQAVGPGVKVLAGTGSNSTGEAVKATREAAASGADGALVVVPYYNKPPQEGLEAHFRAIANAAPELPLMLYNVPGRTGTSLAPA---TAAQLMNCANV 168
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_STRMK (Dihydrodipicolinate synthase OS=Stenotrophomonas maltophilia (strain K279a) GN=dapA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25 Identity = 56/158 (35.44%), Postives = 91/158 (57.59%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 LITA+ TP+ DG D + + L+++Q+ G G++V G+TGE ++ E+ +L+ V G + V+ TG + T + I T + A+G AL + P Y + + GLI+H+ +V G P ++YNVP RTG D+ P + +A PN+ G+KE Sbjct: 6 LITALATPFRADGALDPDGWQRLLHLQLEGGVHGVVVAGSTGEAATLTDAEYDLLLASAVERIGGRIPVMAGTGLSGTAKTIEQTRRAAALGASHALVVTPPYVRPTQAGLIAHYRAVADQGGLPVVLYNVPGRTGCDMQPETVAELASHPNIVGIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_EXIS2 (Dihydrodipicolinate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25 Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TA+ TP+ G DL ++ L+ Q+ + ++VGGTTGEG ++ +E L+ + V VI TG+N+T + I T+ +G AA+ + PYY KTS GL++HF +V P ++YNVPSRTG I T+A+ PN+ KE Sbjct: 7 TALATPFTSTGELDLAVFEQLIEQQLAANIQALVVGGTTGEGSTLTNEEFETLLETAIRVTAGRVPVIAGTGTNNTAQTIEKTQTAARLGADAAMLVTPYYNKTSQAGLVAHFTAVADAVDLPIMLYNVPSRTGVAISVETAVTLAKHPNIQAFKE 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_THIDA (Dihydrodipicolinate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dapA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25 Identity = 66/166 (39.76%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 242 AEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 AE A + AI TP DG DL A L++ I G +G+++ GTTGE +++DEH +LI V G V VI TG+NST EAI TE A G A L + PYY K + EGL H+ + P I+YNVP RT D+ +A+ P + G+K+ Sbjct: 2 AEISTARGSLVAIVTPMSDDGALDLGALRRLIDWHIEQGTDGIVIVGTTGESPTVNFDEHCLLIRTAVEQAGGRVPVIAGTGANSTSEAIALTECARAAGAQAGLSVVPYYNKPTQEGLYQHYRKIAEAVDLPLILYNVPGRTVADLANDTAVRLAEVPGIVGLKD 167
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNPX (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain WH8102) GN=dapA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25 Identity = 56/159 (35.22%), Postives = 84/159 (52.83%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 R++TA+ TP+ G DL L + G++G++V GTTGE +SW E + L+ G+ +V+ TGSN T EA+ AT Q A G AL + PYY K +GL +HF ++ P + +YN+P RTG + P + + PN+ K Sbjct: 14 RVVTAMVTPFDDSGAVDLPLAGRLARHLVEQGSDGLVVSGTTGESPTLSWQEQLQLLQAVREAVGSDAQVLAGTGSNCTAEAVEATRQAAAAGADGALVVVPYYNKPPQDGLAAHFRAIAEAAPELPLMLYNIPGRTGCSMAPETVAQLMDCPNVVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNJB (Dihydrodipicolinate synthase OS=Synechococcus sp. GN=dapA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25 Identity = 55/159 (34.59%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 R++TA+ TP+ +G + + L + +G++G++V GTTGE ++W E L + KVI TGSNSTREAI AT++ +G+ +L + PYY K + GL HF ++ P ++YN+PSRTG + P + +A+ + +KE Sbjct: 5 RVLTAMVTPFTDEGELNYDEAARLADYLATHGSDGLVVCGTTGESPTLTWQEEYELFRVVRDAVAGRAKVIAGTGSNSTREAIEATKKAAQLGLDGSLQVVPYYNKPTQAGLYEHFKAIAQASDLPILLYNIPSRTGASLQPETVAQLAELETVVAIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LARHH (Dihydrodipicolinate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dapA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25 Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + AI TP L DG D EA D LV+ I +G G++ GTTGE ++ +EH+ ++ V +KVI G+NST EAI T + +G L + PYY K + EG+ HF ++ P I+YNVP RT D+ + +A+ PN+ G+K+ Sbjct: 6 LVAIVTPMLEDGSVDFEALDRLVDFHIESGTSGIVAVGTTGESAALAVEEHLQVVAAVVKRAAGRIKVIAGAGANSTHEAIDLTRESRRLGADQVLSVVPYYNKPTQEGMYRHFRAIAESTDIPVILYNVPGRTVADMCNDTVLRLAEIPNIIGLKD 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_THEYD (Dihydrodipicolinate synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dapA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25 Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + AI TP+ G+ D +A++ L+ I G G++ GTTGE + ++EH +I TV + VI TGSNST EAI T++ +G AAL + PYY K + EGL H+ + P I+YNVP RT +I P+ + +A+ P + G+KE Sbjct: 6 MVAIVTPF-KKGKIDEKAFEKLIEWHIKEGTHGIVPCGTTGEASTLDYEEHYKVIEITVKVVNKRIPVIAGTGSNSTDEAIMITKKAEKLGADAALLVTPYYNKPTQEGLYRHYKEIADKTGIPLILYNVPGRTSVNILPQTVARLAEHPRIVGIKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_STRM5 (Dihydrodipicolinate synthase OS=Stenotrophomonas maltophilia (strain R551-3) GN=dapA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25 Identity = 56/158 (35.44%), Postives = 90/158 (56.96%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 LITA+ TP+ DG D + + L+++Q+ G G++V G+TGE ++ E+ L+ V G + V+ TG + T + I T + A+G AL + P Y + + GLI+H+ +V G P ++YNVP RTG D+ P + +A PN+ G+KE Sbjct: 6 LITALATPFRADGALDPDGWQRLLHLQLEGGVHGVVVAGSTGEAATLTDAEYDQLLASAVERIGGRIPVMAGTGLSGTAKTIEQTRRAAALGASHALVVTPPYVRPTQAGLIAHYRAVADQGGLPVVLYNVPGRTGCDMQPETVAELASHPNIVGIKE 163
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_OENOB (Dihydrodipicolinate synthase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.489e-25 Identity = 63/159 (39.62%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 266 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT-EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL--SMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 L+TAI TP+ + R D + Y L++ QI +G +G ++ GTTGE +S DE I L TV+ KVI TGSN+T+E I T E G G+ AAL + PYY K G+I+HF ++ S P +IYN+P R+ + + +A PN+ VK+ Sbjct: 10 LLTAIITPFDKNNRIDFQVYRRLIDSQISDGVKGFVISGTTGEAPTLSHDEKIELFKRTVDFVSGRAKVIVGTGSNNTKETIEFTKEAGRINGIDAALIVTPYYNKPDQAGMIAHFSTIADESPLPIVIYNIPGRSISALTVESLLKLADHPNIIAVKQ 168 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |