FC869293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROMA (Dihydrodipicolinate synthase OS=Prochlorococcus marinus GN=dapA PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.109e-24 Identity = 62/159 (38.99%), Postives = 82/159 (51.57%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 RL+TA+ TP+ G D L + G++G+IV GTTGE +SW+E L+ N S KV+ TGSNST EAIHAT + G AL + PYY K GL SHF +V P + +YN+P RTG I P + + N+ K Sbjct: 14 RLLTAMVTPFDTAGAVDFALAARLARYLVDQGSDGLIVCGTTGESPTLSWEEQYQLLETVRNAVNGSAKVLAGTGSNSTSEAIHATAKAAEAGADGALVVVPYYNKPPQAGLESHFRAVAQAAPDLPLMLYNIPGRTGCSISPITVQRLMNCSNIVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_NITEU (Dihydrodipicolinate synthase OS=Nitrosomonas europaea GN=dapA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.109e-24 Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 + AI TP L DG DL+ + L++ I +G++V GTTGE + +DEH +LI V + VI TG+NSTREAI T G A L + PYY K + EGL HF ++ P I+YNVP RT DI +AQ P + G+K+ Sbjct: 6 LVAIVTPMLEDGALDLDRFCALIDFHIEQKTDGIVVVGTTGESPTVDFDEHHLLIRTAVTHAAGRIPVIAGTGANSTREAIELTVFSKNAGADACLSVAPYYNKPTQEGLYQHFKAIAEAVDIPMILYNVPGRTVVDISNDTALRLAQIPGIVGIKD 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_SYNPW (Dihydrodipicolinate synthase OS=Synechococcus sp. (strain WH7803) GN=dapA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24 Identity = 58/159 (36.48%), Postives = 84/159 (52.83%), Query Frame = 2 Query: 263 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTI---IYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 RL+TA+ TP+ +G DL L + G++G++V GTTGE +SWDE L+ G V V+ TGSN T+EA+ AT + A G AL + PYY K EGL +HF ++ P + +YN+P RTG + P + + N+ K Sbjct: 14 RLLTAMVTPFDAEGAVDLALAGRLARHLVDEGSDGLVVCGTTGESPTLSWDEQSQLLEAVRQAVGPGVPVLAGTGSNCTQEAVKATREAAAAGADGALVVTPYYNKPPQEGLEAHFRAIAEAAPELPLMLYNIPGRTGCSMEPATVARLMDCSNIVSFK 172
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LEPBL (Dihydrodipicolinate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dapA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL--SMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TAI TP+ D + D ++Y+ L+ QI G G++ GTTGE +S EH LI TV ++V+ TGSNSTREAI TE + L +NPYY K + EGL HF +V S P ++YN+P RT ++ P + +++ + +KE Sbjct: 7 TAIITPFKND-KIDYDSYNKLLEKQIKAGVNGVVPCGTTGESPTLSHTEHAELIRETVKAVQGKIQVVAGTGSNSTREAIELTEAACKDSVDGILSVNPYYNKPTQEGLFQHFQAVAEHSSVPVMLYNIPGRTSINLQPETVFRLSEIKRIRSMKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LEPBJ (Dihydrodipicolinate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dapA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL--SMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TAI TP+ D + D ++Y+ L+ QI G G++ GTTGE +S EH LI TV ++V+ TGSNSTREAI TE + L +NPYY K + EGL HF +V S P ++YN+P RT ++ P + +++ + +KE Sbjct: 7 TAIITPFKND-KIDYDSYNKLLEKQIKAGVNGVVPCGTTGESPTLSHTEHAELIRETVKAVQGKIQVVAGTGSNSTREAIELTEAACKDSVDGILSVNPYYNKPTQEGLFQHFQAVAEHSSVPVMLYNIPGRTSINLQPETVFRLSEIKRIRSMKE 161
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_HERAR (Dihydrodipicolinate synthase OS=Herminiimonas arsenicoxydans GN=dapA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24 Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I AI TP DG DL L++ I G +G+++ GTTGE +S DEH LI V + +I TG NST EAI T+ VG A+L + PYY + + EG+ HF ++ P I+YNVP RT D+ I +AQ P++ GVK+ Sbjct: 6 IVAIVTPMHADGALDLPGLRKLIDWHIAEGTDGIVIVGTTGESPTVSVDEHCELIRVAVEHTAKRIPIIAGTGGNSTSEAIELTQFAKDVGADASLQVVPYYNRPTQEGMYQHFKKIVEAVDLPAILYNVPGRTVADMSNETILRLAQIPSVIGVKD 162
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_PROMP (Dihydrodipicolinate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 2 Query: 224 VKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 730 + N T + R++TA+ TP+ +G D E L N NG++G+++ GTTGE ++W E L + KVI TGSN T EAI AT++ + G AL + PYY K EGL HF S+ + P ++YN+P RTG ++ P ++ + PN+ +K Sbjct: 2 IPNNTKFSNPLFGRILTAMVTPFKKNGAVDYELAIKLSNYLCENGSDGIVLCGTTGESPTLTWAEQHNLFVAVKGSLNSRSKVIVGTGSNCTSEAIEATQKAYEFGADGALVVVPYYNKPPQEGLYKHFSSIANAASDLPLMLYNIPGRTGCNLLPTTVNKLMNFPNILSIK 173
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LEPIN (Dihydrodipicolinate synthase OS=Leptospira interrogans GN=dapA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL--SMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TAI TP+ D + D ++Y L+ QI G G++ GTTGE +S EH LI TV ++V+ TGSNST+EAI TE G+ L +NPYY K + EGL HF S+ S P ++YN+P RT ++ P + +++ + +KE Sbjct: 20 TAIITPFKND-KIDYDSYFKLLEKQIKAGVSGVVPCGTTGESPTLSHSEHAELIRETVKAVQGKIQVVAGTGSNSTKEAIELTEAACKDGVDGILSVNPYYNKPTQEGLFQHFKSIAEHSTVPVMLYNIPGRTSVNLLPETVLRLSEVKQIRSMKE 174
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_LEPIC (Dihydrodipicolinate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dapA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 272 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL--SMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 TAI TP+ D + D ++Y L+ QI G G++ GTTGE +S EH LI TV ++V+ TGSNST+EAI TE G+ L +NPYY K + EGL HF S+ S P ++YN+P RT ++ P + +++ + +KE Sbjct: 20 TAIITPFKND-KIDYDSYFKLLEKQIKAGVSGVVPCGTTGESPTLSHSEHAELIRETVKAVQGKIQVVAGTGSNSTKEAIELTEAACKDGVDGILSVNPYYNKPTQEGLFQHFKSIAEHSTVPVMLYNIPGRTSVNLLPETVLRLSEVKQIRSMKE 174
BLAST of FC869293 vs. ExPASy Swiss-Prot
Match: DAPA_GEOMG (Dihydrodipicolinate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dapA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 269 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 733 I AI TP+ +G+ D E +LV QI NG + ++ GTTGE + +DEH+ ++ + V VI TGSNST EAI +++ VG L + PYY K + EGL+ H+ ++ P I+YNVP RTG ++ P + +A N+ +KE Sbjct: 6 IVAIVTPF-NNGQVDFEKLRELVEFQISNGTDAIVPCGTTGEASTLDYDEHMDVVKTVIEQVNKRVPVIAGTGSNSTAEAIELSQKAKEVGADGVLLVTPYYNKPTQEGLVRHYTAIADAVAIPQILYNVPGRTGVNMLPETVARLAPHKNIVAIKE 161 The following BLAST results are available for this feature:
BLAST of FC869293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 490
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869293 ID=FC869293; Name=FC869293; organism=Citrus clementina; type=EST; length=735bpback to top |